RNA–Protein interactions for RNA: ENST00000496946.1

SNRNP48-202, Transcript of small nuclear ribonucleoprotein U11/U12 subunit 48, humanhuman

TSL 2

Gene SNRNP48, Length 2,610 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNRNP48-202ENST00000496946 SULT1A3P0DMM9 295 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 SULT1A4P0DMN0 295 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM225BP0DP42 221 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 CYBAP13498 195 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 HTR1DP28221 377 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 OPRD1P41143 372 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 NBL1P41271 181 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 GYG1P46976 350 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 CX3CR1P49238 355 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 BACE1P56817 501 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 SRPXP78539 464 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 RPL24P83731 157 aaKnown RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 DPTQ07507 201 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 MEF2DQ14814 521 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 LINC01620Q4KN68 170 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 TBPL2Q6SJ96 375 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 OSR2Q8N2R0 312 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 STPG4Q8N801 248 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 OR4N2Q8NGD1 307 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 LMO3Q8TAP4 145 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 BLNKQ8WV28 456 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 RSPRY1Q96DX4 576 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 GRAMD2BQ96HH9 432 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 CIB3Q96Q77 187 aaPredicted RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 CDX2Q99626 313 aaPredicted RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 DERL1Q9BUN8 251 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 OR52D1Q9H346 318 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 RBKSQ9H477 322 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 POPDC3Q9HBV1 291 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 EXOSC4Q9NPD3 245 aaKnown RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 MRPL17Q9NRX2 175 aaKnown RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 SPANXCQ9NY87 97 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 TAS2R16Q9NYV7 291 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 PRO0628Q9UI54 55 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 YARS2Q9Y2Z4 477 aaKnown RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 UBIAD1Q9Y5Z9 338 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 COL5A2P05997 1499 aaPredicted RBP2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 KIF1AQ12756 1690 aa2.67□□□□□ -1.98
SNRNP48-202ENST00000496946 DLC1Q96QB1 1528 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 TNKS1BP1Q9C0C2 1729 aaKnown RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 SCN4AP35499 1836 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 ECM29Q5VYK3 1845 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 CDK5RAP2Q96SN8 1893 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 RNF222A6NCQ9 220 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 GAGE12HA6NDE8 117 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 GAGE12JA6NER3 117 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 FOXI3A8MTJ6 420 aaPredicted RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 B4DGG1 531 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 E7EQ34 232 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 PHF1O43189 567 aaPredicted RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 SLC37A4O43826 429 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 ZG16O60844 167 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 GAGE7O76087 117 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 KLF8O95600 359 aaPredicted RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 EML2O95834 649 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 P04436 131 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 GAGE12FP0CL80 117 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 GAGE12GP0CL81 117 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 GAGE12IP0CL82 117 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 LIMS3P0CW19 117 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 LIMS4P0CW20 117 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 LAMP1P11279 417 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 CD1DP15813 335 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 TNFRSF1BP20333 461 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 CD34P28906 385 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 RPL12P30050 165 aaKnown RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 HRH1P35367 487 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 TGFBR1P36897 503 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 POLR2HP52434 150 aaKnown RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 STC1P52823 247 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM50BP56557 158 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 LSM3P62310 102 aaKnown RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 GAGE4Q13068 117 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 UBE2V2Q15819 145 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 TAL2Q16559 108 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 RPEL1Q2QD12 228 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 FAM174BQ3ZCQ3 159 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 FFAR4Q5NUL3 377 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 FAM90A2PQ658T7 463 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 OR10K2Q6IF99 312 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 OPN5Q6U736 354 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 C12orf54Q6X4T0 127 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 PPP1R32Q7Z5V6 425 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 CALHM3Q86XJ0 350 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF440Q8IYI8 595 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 CA13Q8N1Q1 262 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 LRRC57Q8N9N7 239 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 POC1AQ8NBT0 407 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 OR4K1Q8NGD4 311 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 TMEM174Q8WUU8 243 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 MRPL53Q96EL3 112 aaKnown RBP2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 ZNF488Q96MN9 340 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 DEFB118Q96PH6 123 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 TBX15Q96SF7 602 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 FAM234AQ9H0X4 552 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 OR51J1Q9H342 316 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 A4GALTQ9NPC4 353 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 UQCC1Q9NVA1 299 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 SLC25A37Q9NYZ2 338 aa2.66□□□□□ -1.98
SNRNP48-202ENST00000496946 THYN1Q9P016 225 aa2.66□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 34.6 ms