RNA–Protein interactions for RNA: ENST00000496514.5

PDE6B-212, Transcript of phosphodiesterase 6B, humanhuman

APPRIS P3 TSL 1 (best) BASIC

Gene PDE6B, Length 3,232 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDE6B-212ENST00000496514 LDAHQ9H6V9 325 aa10.65□□□□□ -0.7
PDE6B-212ENST00000496514 MEX3AA1L020 520 aaKnown RBP10.65□□□□□ -0.7
PDE6B-212ENST00000496514 IL2RAP01589 272 aa10.65□□□□□ -0.7
PDE6B-212ENST00000496514 CST2P09228 141 aa10.65□□□□□ -0.7
PDE6B-212ENST00000496514 SELEP16581 610 aa10.65□□□□□ -0.7
PDE6B-212ENST00000496514 CLDN18P56856 261 aa10.65□□□□□ -0.7
PDE6B-212ENST00000496514 RNFT1Q5M7Z0 435 aa10.65□□□□□ -0.7
PDE6B-212ENST00000496514 SLC22A25Q6T423 547 aa10.65□□□□□ -0.7
PDE6B-212ENST00000496514 FOXL2NBQ6ZUU3 175 aa10.65□□□□□ -0.7
PDE6B-212ENST00000496514 INO80EQ8NBZ0 244 aaPredicted RBP10.65□□□□□ -0.7
PDE6B-212ENST00000496514 CLRN3Q8NCR9 226 aa10.65□□□□□ -0.7
PDE6B-212ENST00000496514 CPNE4Q96A23 557 aaPredicted RBP10.65□□□□□ -0.7
PDE6B-212ENST00000496514 ZNF442Q9H7R0 627 aa10.65□□□□□ -0.7
PDE6B-212ENST00000496514 TRAV39A0A0B4J263 110 aa10.65□□□□□ -0.71
PDE6B-212ENST00000496514 NXPH3O95157 252 aa10.65□□□□□ -0.71
PDE6B-212ENST00000496514 IGHEP01854 428 aa10.65□□□□□ -0.71
PDE6B-212ENST00000496514 CRHP06850 196 aa10.65□□□□□ -0.71
PDE6B-212ENST00000496514 MEOX1P50221 254 aa10.65□□□□□ -0.71
PDE6B-212ENST00000496514 ANKRD39Q53RE8 183 aa10.65□□□□□ -0.71
PDE6B-212ENST00000496514 PDZD9Q8IXQ8 264 aa10.65□□□□□ -0.71
PDE6B-212ENST00000496514 FAM89BQ8N5H3 189 aa10.65□□□□□ -0.71
PDE6B-212ENST00000496514 OR5L1Q8NGL2 311 aa10.65□□□□□ -0.71
PDE6B-212ENST00000496514 OCSTAMPQ9BR26 566 aa10.65□□□□□ -0.71
PDE6B-212ENST00000496514 AKAP13Q12802 2813 aa10.65□□□□□ -0.71
PDE6B-212ENST00000496514 SPAARA0A1B0GVQ0 90 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 OR6C6A6NF89 314 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 CYTIPO60759 359 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 FARS2O95363 451 aaKnown RBP10.64□□□□□ -0.71
PDE6B-212ENST00000496514 OR5H8P0DN80 308 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 PSMB6P28072 239 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 PPIAP62937 165 aaKnown RBP10.64□□□□□ -0.71
PDE6B-212ENST00000496514 Q6ZPA2 131 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 ZNF611Q8N823 705 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 TMED6Q8WW62 240 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 FAM173AQ9BQD7 235 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 RNF126Q9BV68 326 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 TMEM231Q9H6L2 316 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 ASF1BQ9NVP2 202 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 OSGIN2Q9Y236 505 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 ATMQ13315 3056 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 MED19A0JLT2 244 aaPredicted RBP10.64□□□□□ -0.71
PDE6B-212ENST00000496514 FAM74A7A6NL05 159 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 SFT2D2O95562 160 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 CD8AP01732 235 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 CYC1P08574 325 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 SSX2Q16385 188 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 FAM74A3Q4VXF1 159 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 SSX9Q7RTT3 188 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 OVCH2Q7RTZ1 564 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 C17orf78Q8N4C9 275 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 OR5M9Q8NGP3 310 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 OR6K3Q8NGY3 331 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 NEK7Q8TDX7 302 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 SPRY4Q9C004 299 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 FGF23Q9GZV9 251 aaPredicted RBP10.64□□□□□ -0.71
PDE6B-212ENST00000496514 FBLN5Q9UBX5 448 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 STARD10Q9Y365 291 aa10.64□□□□□ -0.71
PDE6B-212ENST00000496514 LSM5Q9Y4Y9 91 aaKnown RBP10.64□□□□□ -0.71
PDE6B-212ENST00000496514 hCG_38984A0A1B0GV85 526 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 MFSD2BA6NFX1 497 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 FOXI3A8MTJ6 420 aaPredicted RBP10.63□□□□□ -0.71
PDE6B-212ENST00000496514 UBBP0CG47 229 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 H3F3CQ6NXT2 135 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 RBMS3Q6XE24 437 aaKnown RBP10.63□□□□□ -0.71
PDE6B-212ENST00000496514 SCGNO76038 276 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 DIRAS3O95661 229 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 MMP7P09237 267 aaPredicted RBP10.63□□□□□ -0.71
PDE6B-212ENST00000496514 RCC1P18754 421 aaPredicted RBP10.63□□□□□ -0.71
PDE6B-212ENST00000496514 BCL3P20749 454 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 ASCL1P50553 236 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 ZNF133P52736 654 aaPredicted RBP10.63□□□□□ -0.71
PDE6B-212ENST00000496514 RAB1AP62820 205 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 VAX1Q5SQQ9 334 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 DPPA2Q7Z7J5 298 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 MYPOPQ86VE0 399 aaPredicted RBP10.63□□□□□ -0.71
PDE6B-212ENST00000496514 ZNF100Q8IYN0 542 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 ARRDC1Q8N5I2 433 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 MRPL24Q96A35 216 aaKnown RBP10.63□□□□□ -0.71
PDE6B-212ENST00000496514 NTNG2Q96CW9 530 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 AUP1Q9Y679 476 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 NKX2-8O15522 239 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 XRCC2O43543 280 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 SYNGR4O95473 234 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 FPR2P25090 351 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 KCNJ3P48549 501 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 HFEQ30201 348 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 OR2A2Q6IF42 318 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 MCEMP1Q8IX19 187 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 KCNRGQ8N5I3 272 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 TMEM185AQ8NFB2 350 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 ZNF552Q9H707 407 aaPredicted RBP10.63□□□□□ -0.71
PDE6B-212ENST00000496514 TAS2R3Q9NYW6 316 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 C14orf166Q9Y224 244 aaKnown RBP10.63□□□□□ -0.71
PDE6B-212ENST00000496514 SESN1Q9Y6P5 492 aa10.63□□□□□ -0.71
PDE6B-212ENST00000496514 COL27A1Q8IZC6 1860 aaPredicted RBP10.62□□□□□ -0.71
PDE6B-212ENST00000496514 PCNX1Q96RV3 2341 aa10.62□□□□□ -0.71
PDE6B-212ENST00000496514 BCL2L11O43521 198 aa10.62□□□□□ -0.71
PDE6B-212ENST00000496514 EIF3GO75821 320 aaKnown RBP eCLIP10.62□□□□□ -0.71
PDE6B-212ENST00000496514 AGTR1P30556 359 aa10.62□□□□□ -0.71
PDE6B-212ENST00000496514 FCGR2CP31995 323 aa10.62□□□□□ -0.71
Retrieved 100 of 20,778 RNA–protein pairs in 39.6 ms