RNA–Protein interactions for RNA: ENST00000496468.1

TSSC4-210, Transcript of tumor suppressing subtransferable candidate 4, humanhuman

APPRIS ALT2 TSL 1 (best)

Gene TSSC4, Length 912 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSSC4-210ENST00000496468 SMIM31A0A1B0GVY4 71 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 F5H0A9 414 aaPredicted RBP15.31■□□□□ 0.04
TSSC4-210ENST00000496468 MPIG6BO95866 241 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 HAND1O96004 215 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 TFF1P04155 84 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 VSIG8P0DPA2 414 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 MGMTP16455 207 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 RPS19P39019 145 aaKnown RBP15.31■□□□□ 0.04
TSSC4-210ENST00000496468 LOXL1Q08397 574 aaPredicted RBP15.31■□□□□ 0.04
TSSC4-210ENST00000496468 ZNF146Q15072 292 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 NHLRC3Q5JS37 347 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 OR2W3Q7Z3T1 314 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 LINC00596Q86U02 117 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 FAM216BQ8N7L0 139 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 TMEM104Q8NE00 496 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 OR51D1Q8NGF3 324 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 OR51T1Q8NGJ9 327 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 KCNG3Q8TAE7 436 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 SLC25A46Q96AG3 418 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 NEIL1Q96FI4 390 aaPredicted RBP15.31■□□□□ 0.04
TSSC4-210ENST00000496468 GAFA1Q96PS6 74 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 CCL13Q99616 98 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 TMEM59Q9BXS4 323 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 BANF2Q9H503 90 aa15.31■□□□□ 0.04
TSSC4-210ENST00000496468 PATZ1Q9HBE1 687 aaKnown RBP15.31■□□□□ 0.04
TSSC4-210ENST00000496468 A0A0B4J203 849 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 A0A1B0GW55 424 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 H7C1Q1 480 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 DUX4L2P0CJ85 424 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 DUX4L3P0CJ86 424 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 DUX4L4P0CJ87 422 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 DUX4L5P0CJ88 424 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 DUX4L6P0CJ89 424 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 DUX4L7P0CJ90 424 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 DUSP1P28562 367 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 PRDX2P32119 198 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 IL13RA1P78552 427 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 IKZF1Q13422 519 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 UNC119Q13432 240 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 SPCS2Q15005 226 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 IDNKQ5T6J7 187 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 OR10K2Q6IF99 312 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 DUX4L9Q6RFH8 374 aaPredicted RBP15.3■□□□□ 0.04
TSSC4-210ENST00000496468 LYPD2Q6UXB3 125 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 ZNF788Q6ZQV5 615 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 MRPS24Q96EL2 167 aaKnown RBP15.3■□□□□ 0.04
TSSC4-210ENST00000496468 SELENOIQ9C0D9 397 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 CTSZQ9UBR2 303 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 DUX4Q9UBX2 424 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 RSL24D1Q9UHA3 163 aaKnown RBP15.3■□□□□ 0.04
TSSC4-210ENST00000496468 ST3GAL6Q9Y274 331 aa15.3■□□□□ 0.04
TSSC4-210ENST00000496468 TMEM14DPA8MWL7 114 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 SIGLEC5O15389 551 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 TMEM127O75204 238 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 ZNF44P15621 663 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 IL2RGP31785 369 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 PITPNBP48739 271 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 QRFPP83859 136 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 ESCO2Q56NI9 601 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 ATPAF1Q5TC12 328 aaPredicted RBP15.29■□□□□ 0.04
TSSC4-210ENST00000496468 ZNF561Q8N587 486 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 CD177Q8N6Q3 437 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 ASCC1Q8N9N2 400 aaKnown RBP15.29■□□□□ 0.04
TSSC4-210ENST00000496468 MAPK1IP1LQ8NDC0 245 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 LGALS14Q8TCE9 139 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 SDSLQ96GA7 329 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 Q96M66 194 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 KAAG1Q9UBP8 84 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 OTOGQ6ZRI0 2925 aa15.29■□□□□ 0.04
TSSC4-210ENST00000496468 CR1P17927 2039 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 TMEM272A0A1B0GTI8 110 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 ZNF701M0R085 212 aaPredicted RBP15.28■□□□□ 0.04
TSSC4-210ENST00000496468 SIRPB1O00241 398 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 SH2D1BO14796 132 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 TNFRSF13BO14836 293 aaPredicted RBP15.28■□□□□ 0.04
TSSC4-210ENST00000496468 GEMIN2O14893 280 aaKnown RBP15.28■□□□□ 0.04
TSSC4-210ENST00000496468 OR7C1O76099 320 aaPredicted RBP15.28■□□□□ 0.04
TSSC4-210ENST00000496468 OR2H2O95918 312 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 CHRM2P08172 466 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 SELLP14151 372 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 SNRPBP14678 240 aaKnown RBP15.28■□□□□ 0.04
TSSC4-210ENST00000496468 AMY2BP19961 511 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 CPT2P23786 658 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 LMO4P61968 165 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 RPS27AP62979 156 aaKnown RBP15.28■□□□□ 0.04
TSSC4-210ENST00000496468 COL10A1Q03692 680 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 MPV17LQ2QL34 196 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 SPNS3Q6ZMD2 512 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 TMEM185AQ8NFB2 350 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 MED30Q96HR3 178 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 MRI1Q9BV20 369 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 NDUFA13Q9P0J0 144 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 FBLN5Q9UBX5 448 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 METRNQ9UJH8 293 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 MYO9AB2RTY4 2548 aa15.28■□□□□ 0.04
TSSC4-210ENST00000496468 DPPA5A6NC42 116 aa15.27■□□□□ 0.04
TSSC4-210ENST00000496468 SMAD7O15105 426 aaKnown RBP15.27■□□□□ 0.04
TSSC4-210ENST00000496468 GABRR1P24046 479 aa15.27■□□□□ 0.04
TSSC4-210ENST00000496468 RORCP51449 518 aa15.27■□□□□ 0.04
TSSC4-210ENST00000496468 SCAND1P57086 179 aa15.27■□□□□ 0.04
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms