RNA–Protein interactions for RNA: ENST00000496458.1

SF3B1-212, Transcript of splicing factor 3b subunit 1, humanhuman

TSL 2

Gene SF3B1, Length 475 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3B1-212ENST00000496458 DUX4L3P0CJ86 424 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 DUX4L5P0CJ88 424 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 DUX4L6P0CJ89 424 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 DUX4L7P0CJ90 424 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 ZNF7P17097 686 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 S100PP25815 95 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 HTR1FP30939 366 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 MAS1LP35410 378 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 SLC18A1P54219 525 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 TAS2R39P59534 338 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 AP3S2P59780 193 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 COPZ1P61923 177 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 AP1S1P61966 158 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 DYNLL1P63167 89 aaKnown RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 REEP5Q00765 189 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 SP4Q02446 784 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 GLO1Q04760 184 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 PSMD5Q16401 504 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 TAL2Q16559 108 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 COX19Q49B96 90 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 KLHL12Q53G59 568 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 RBM48Q5RL73 367 aaKnown RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 TIMM23BQ5SRD1 257 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 GPRC6AQ5T6X5 926 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 OGFRL1Q5TC84 451 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 FKBP1CQ5VVH2 108 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 FRMPD2BQ6IN97 320 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 DUX4L9Q6RFH8 374 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 VKORC1L1Q8N0U8 176 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 CYP4Z2PQ8N1L4 340 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 OR5M1Q8NGP8 315 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 OR2G2Q8NGZ5 317 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 OR5AK3PQ8NH89 298 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 NEIL3Q8TAT5 605 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 BLOC1S5Q8TDH9 187 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 FAM151AQ8WW52 585 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 NTAN1Q96AB6 310 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 ISOC1Q96CN7 298 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 CDK5RAP2Q96SN8 1893 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 MCHR1Q99705 422 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 ARHGDIGQ99819 225 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 FOXC2Q99958 501 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 KCTD14Q9BQ13 255 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 AGMATQ9BSE5 352 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 SLC22A4Q9H015 551 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 ALX4Q9H161 411 aaPredicted RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 C11orf49Q9H6J7 331 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 CTPS2Q9NRF8 586 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 C19orf12Q9NSK7 152 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 CMTM6Q9NX76 183 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 DUX4Q9UBX2 424 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 BAZ2BQ9UIF8 2168 aaKnown RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 RAB23Q9ULC3 237 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 ING4Q9UNL4 249 aa3.4□□□□□ -1.87
SF3B1-212ENST00000496458 SBDSQ9Y3A5 250 aaKnown RBP eCLIP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 SAMHD1Q9Y3Z3 626 aaKnown RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 MTCL1Q9Y4B5 1905 aaKnown RBP3.4□□□□□ -1.87
SF3B1-212ENST00000496458 RFX7Q2KHR2 1363 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 IGLV3-22A0A075B6J6 115 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 A0A087WXM4 84 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 SEC14L6B5MCN3 397 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 CST8O60676 142 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 EIF1BO60739 113 aaKnown RBP3.39□□□□□ -1.87
SF3B1-212ENST00000496458 AQP8O94778 261 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 PTTG1O95997 202 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 LALBAP00709 142 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 INSP01308 110 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 GYPCP04921 128 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 SMIM6P0DI80 62 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 CT45A6P0DMU7 189 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 CT45A5P0DMU8 189 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 CT45A7P0DMV0 189 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 COX5BP10606 129 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 HSPD1P10809 573 aaKnown RBP3.39□□□□□ -1.87
SF3B1-212ENST00000496458 TBPP20226 339 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 COILP38432 576 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-212ENST00000496458 EIF1P41567 113 aaKnown RBP3.39□□□□□ -1.87
SF3B1-212ENST00000496458 MAGEA3P43357 314 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 NDUFA8P51970 172 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 TMBIM6P55061 237 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 ZNHIT3Q15649 155 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-212ENST00000496458 BSXQ3C1V8 233 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 ACTBL2Q562R1 376 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 CT45A1Q5HYN5 189 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 UBE2UQ5VVX9 321 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 WDR82Q6UXN9 313 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 TAC4Q86UU9 113 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 CTAGE3PQ8IX95 158 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 LRRC52Q8N7C0 313 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 ZNF557Q8N988 423 aaPredicted RBP3.39□□□□□ -1.87
SF3B1-212ENST00000496458 ACOT4Q8N9L9 421 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 LINC00301Q8NCQ3 95 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 DUSP18Q8NEJ0 188 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 OR51A7Q8NH64 312 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 CT45A3Q8NHU0 189 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 RNASEH2CQ8TDP1 164 aaKnown RBP3.39□□□□□ -1.87
SF3B1-212ENST00000496458 PYDC1Q8WXC3 89 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 C12orf43Q96C57 262 aaKnown RBP3.39□□□□□ -1.87
SF3B1-212ENST00000496458 WDR34Q96EX3 536 aa3.39□□□□□ -1.87
SF3B1-212ENST00000496458 CMTM7Q96FZ5 175 aa3.39□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 46.2 ms