RNA–Protein interactions for RNA: ENST00000496189.1

SF3A1-209, Transcript of splicing factor 3a subunit 1, humanhuman

TSL 2

Gene SF3A1, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SF3A1-209ENST00000496189 CHRM2P08172 466 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 FSTP19883 344 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 PDZK1IP1Q13113 114 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 DOC2BQ14184 412 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 DGUOKQ16854 277 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 SAXO1Q8IYX7 474 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 KIR3DL3Q8N743 410 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 ASCC1Q8N9N2 400 aaKnown RBP13.54□□□□□ -0.24
SF3A1-209ENST00000496189 ZSCAN4Q8NAM6 433 aaPredicted RBP13.54□□□□□ -0.24
SF3A1-209ENST00000496189 DERL3Q96Q80 235 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 RHOFQ9HBH0 211 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 HES4Q9HCC6 221 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 VCX3AQ9NNX9 186 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 MTCH1Q9NZJ7 389 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 ZNF222Q9UK12 451 aa13.54□□□□□ -0.24
SF3A1-209ENST00000496189 IGHV3OR16-10A0A075B7F0 116 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 hCG_1809904A0A1W2PP81 198 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 A0A1W2PPE2 198 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 A0A1W2PPK0 400 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 A0A1W2PR64 198 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 A0A1W2PRV1 198 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 MEGF11A6BM72 1044 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 TMEM225BP0DP42 221 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 SELLP14151 372 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 HILS1P60008 231 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 ERVK11-1P61568 191 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 SPIN3Q5JUX0 258 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 UBE2UQ5VVX9 321 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 CEACAM19Q7Z692 300 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 PHC2Q8IXK0 858 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 FAM58AQ8N1B3 248 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 C8orf46Q8TAG6 207 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 ZFAND2BQ8WV99 257 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 PHYHIPQ92561 330 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 TMEM203Q969S6 136 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 RFT1Q96AA3 541 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 SPACA5Q96QH8 159 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 FAM234AQ9H0X4 552 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 SLITRK2Q9H156 845 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 NOX4Q9NPH5 578 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 ZNF69Q9UC07 566 aa13.53□□□□□ -0.24
SF3A1-209ENST00000496189 MXRA5Q9NR99 2828 aa13.52□□□□□ -0.24
SF3A1-209ENST00000496189 SPRY1O43609 319 aaPredicted RBP13.52□□□□□ -0.25
SF3A1-209ENST00000496189 TFF1P04155 84 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 IGHV4-38-2P0DP08 117 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 PRKACAP17612 351 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 IGFBP3P17936 291 aaPredicted RBP13.52□□□□□ -0.25
SF3A1-209ENST00000496189 AMY2BP19961 511 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 PSMB9P28065 219 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 GABRA5P31644 462 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 ZNF93P35789 620 aaPredicted RBP13.52□□□□□ -0.25
SF3A1-209ENST00000496189 BMXP51813 675 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 KLF17Q5JT82 389 aaPredicted RBP13.52□□□□□ -0.25
SF3A1-209ENST00000496189 DDI2Q5TDH0 399 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 UNQ9370/PRO34162Q6UXP9 181 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 CDH26Q8IXH8 852 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 FAM185AQ8N0U4 392 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 CD177Q8N6Q3 437 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 LY6G5BQ8NDX9 201 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 OR52N4Q8NGI2 321 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 OR51A2Q8NGJ7 313 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 OR5D13Q8NGL4 314 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 PPP1R35Q8TAP8 253 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 S100A13Q99584 98 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 MDFIQ99750 246 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 ZMAT3Q9HA38 289 aaKnown RBP13.52□□□□□ -0.25
SF3A1-209ENST00000496189 TCF7L1Q9HCS4 588 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 MAB21L2Q9Y586 359 aa13.52□□□□□ -0.25
SF3A1-209ENST00000496189 A0A087WXM4 84 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 M0R1W7 72 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 CCRL2O00421 344 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 ARL6IP5O75915 188 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 SFTPBP07988 381 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 CEBPDP49716 269 aaPredicted RBP13.51□□□□□ -0.25
SF3A1-209ENST00000496189 RPL31P62899 125 aaKnown RBP13.51□□□□□ -0.25
SF3A1-209ENST00000496189 GUCA2AQ02747 115 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 HSD17B12Q53GQ0 312 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 ASPHD2Q6ICH7 369 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 C9orf139Q6ZV77 190 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 GDPD3Q7L5L3 318 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 VMO1Q7Z5L0 202 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 FGFRL1Q8N441 504 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 NKAIN3Q8N8D7 197 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 TSPAN14Q8NG11 270 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 OR5D18Q8NGL1 313 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 TNFAIP8L1Q8WVP5 186 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 LHX4Q969G2 390 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 ZDHHC16Q969W1 377 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 FAM192AQ9GZU8 254 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 SIRPDQ9H106 197 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 PCDHB16Q9NRJ7 776 aa13.51□□□□□ -0.25
SF3A1-209ENST00000496189 ATRQ13535 2644 aa13.5□□□□□ -0.25
SF3A1-209ENST00000496189 CUBNO60494 3623 aa13.5□□□□□ -0.25
SF3A1-209ENST00000496189 TRAV8-7A0A075B6U6 113 aa13.5□□□□□ -0.25
SF3A1-209ENST00000496189 SH2D1BO14796 132 aa13.5□□□□□ -0.25
SF3A1-209ENST00000496189 HAND1O96004 215 aa13.5□□□□□ -0.25
SF3A1-209ENST00000496189 TK1P04183 234 aa13.5□□□□□ -0.25
SF3A1-209ENST00000496189 MAS1P04201 325 aa13.5□□□□□ -0.25
SF3A1-209ENST00000496189 MMP9P14780 707 aa13.5□□□□□ -0.25
SF3A1-209ENST00000496189 BCL3P20749 454 aa13.5□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 39.4 ms