RNA–Protein interactions for RNA: ENST00000496081.5

HLA-A-208, Transcript of major histocompatibility complex, class I, A, human

Gene HLA-A, Length 1,786 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA		Protein				Prediction (catRAPID)		Interaction (ENCODE eCLIP)
Transcript Symbol	Ensembl Transcript ID	Gene	UniProt Accession	Length	Protein Status	Prediction Score	Prediction z-Score	p-Value	Fold Change
HLA-A-208	ENST00000496081	ANXA7	P20073	488 aa	Known RBP	13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	CBX3	Q13185	183 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	SCGB2B2	Q4G0G5	96 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	WFDC8	Q8IUA0	241 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	FAM58A	Q8N1B3	248 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	OR13C8	Q8NGS7	320 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	DYRK2	Q92630	601 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	CMSS1	Q9BQ75	279 aa	Known RBP	13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	SLC25A21	Q9BQT8	299 aa	Predicted RBP	13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	OR51J1	Q9H342	316 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	PLK3	Q9H4B4	646 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081	DUSP13	Q9UII6	198 aa		13.92	□□□□□ -0.18
HLA-A-208	ENST00000496081		A0A1B0GUH1	482 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	UBE2QL1	A1L167	161 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081		A8MV72	311 aa	Predicted RBP	13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081		F5H5P2	479 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	IGHV3-13	P01766	116 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	HPX	P02790	462 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	AMY2B	P19961	511 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	PMEL	P40967	661 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	MAB21L1	Q13394	359 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	MPV17L	Q2QL34	196 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	VAX1	Q5SQQ9	334 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	ATAD3C	Q5T2N8	411 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	TMEM108	Q6UXF1	575 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	OR13G1	Q8NGZ3	307 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	TMEM171	Q8WVE6	324 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	PRRT1	Q99946	306 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	CXXC4	Q9H2H0	198 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	RHOF	Q9HBH0	211 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	ZNF701	Q9NV72	531 aa	Predicted RBP	13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	POLDIP2	Q9Y2S7	368 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	RLN1	P04808	185 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	PTAFR	P25105	342 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	DUSP1	P28562	367 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	ERVK11-1	P61568	191 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	ACTBL2	Q562R1	376 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	VHLL	Q6RSH7	139 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	GLDN	Q6ZMI3	551 aa	Predicted RBP	13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	SSX8	Q7RTT4	187 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	SPERT	Q8NA61	448 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	DRAXIN	Q8NBI3	349 aa	Predicted RBP	13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	MRGPRF	Q96AM1	343 aa		13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	RCC2	Q9P258	522 aa	Known RBP	13.91	□□□□□ -0.18
HLA-A-208	ENST00000496081	IGKV1D-8	A0A087WSZ0	117 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	IFNA6	P05013	189 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	PGA5	P0DJD9	388 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	VSIG10L2	P0DP72	767 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	DTYMK	P23919	212 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	ASCL1	P50553	236 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	KLF3	P57682	345 aa	Predicted RBP	13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	MRPS15	P82914	257 aa	Known RBP	13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	ZMYND11	Q15326	602 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	METTL11B	Q5VVY1	283 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	SLC36A1	Q7Z2H8	476 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	C11orf53	Q8IXP5	236 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	OR5H2	Q8NGV7	314 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	DACT3	Q96B18	629 aa	Predicted RBP	13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	NRIP2	Q9BQI9	281 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	SEC22C	Q9BRL7	303 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	MED28	Q9H204	178 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	ZNF442	Q9H7R0	627 aa		13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	RANGRF	Q9HD47	186 aa	Predicted RBP	13.9	□□□□□ -0.18
HLA-A-208	ENST00000496081	IGLV3-9	A0A075B6K5	115 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	FAM221A	A4D161	298 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	DPRX	A6NFQ7	191 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	IL5	P05113	134 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	FCGR3A	P08637	254 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	TAS2R46	P59540	309 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	RPS23	P62266	143 aa	Known RBP	13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	CD83	Q01151	205 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	IKZF1	Q13422	519 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	FCN2	Q15485	313 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	LINC00596	Q86U02	117 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081		Q8IYB0	196 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	PIAS4	Q8N2W9	510 aa	Predicted RBP	13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	OR5AP2	Q8NGF4	316 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	MED30	Q96HR3	178 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	WFIKKN1	Q96NZ8	548 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	SYT3	Q9BQG1	590 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	CHST6	Q9GZX3	395 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	TLNRD1	Q9H1K6	362 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	ZNF221	Q9UK13	617 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	EDAR	Q9UNE0	448 aa		13.89	□□□□□ -0.19
HLA-A-208	ENST00000496081	TMEM82	A0PJX8	343 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	ATXN7	O15265	892 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	TPD52L2	O43399	206 aa	Known RBP	13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	ACAA1	P09110	424 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	PPP3CB	P16298	524 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	CHRNB4	P30926	498 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	OR3A3	P47888	321 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	EIF2B2	P49770	351 aa	Known RBP	13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	IL13RA2	Q14627	380 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	MPPED2	Q15777	294 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	ATPAF1	Q5TC12	328 aa	Predicted RBP	13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	PRAMEF6	Q5VXH4	476 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	ARRDC1	Q8N5I2	433 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	NUP37	Q8NFH4	326 aa		13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	GTF3A	Q92664	365 aa	Known RBP	13.88	□□□□□ -0.19
HLA-A-208	ENST00000496081	FYTTD1	Q96QD9	318 aa	Known RBP	13.88	□□□□□ -0.19

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