RNA–Protein interactions for RNA: ENST00000494412.1

CMSS1-207, Transcript of cms1 ribosomal small subunit homolog (yeast), humanhuman

TSL 2

Gene CMSS1, Length 477 nt, Biotype processed transcript, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMSS1-207ENST00000494412 ERICH3Q5RHP9 1530 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 DOCK8Q8NF50 2099 aa2.72□□□□□ -1.97
CMSS1-207ENST00000494412 DENND4BO75064 1496 aaPredicted RBP2.71□□□□□ -1.97
CMSS1-207ENST00000494412 PLA2R1Q13018 1463 aa2.71□□□□□ -1.97
CMSS1-207ENST00000494412 NEO1Q92859 1461 aa2.71□□□□□ -1.97
CMSS1-207ENST00000494412 IGKV6-21A0A0C4DH24 114 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 A0A0G2JMP0 313 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 IGHV7-4-1A0A0J9YVY3 117 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 A0A0X1KG70 313 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 GOLGA6L10A6NI86 522 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 KLRC4-KLRK1H3BQV0 150 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 J3QLI3 93 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 RBFOX2O43251 390 aaKnown RBP eCLIP2.71□□□□□ -1.98
CMSS1-207ENST00000494412 PLIN3O60664 434 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 RAB36O95755 333 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 IGLV3-25P01717 112 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 CDK1P06493 297 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 ADRA2AP08913 450 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 PVALBP20472 110 aaPredicted RBP2.71□□□□□ -1.98
CMSS1-207ENST00000494412 GCLMP48507 274 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 CCL23P55773 120 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 DMC1Q14565 340 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 EXOC3L4Q17RC7 722 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 FBXL19-AS1Q494R0 122 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 TEX30Q5JUR7 227 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 LCE3CQ5T5A8 94 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 CYP4Z2PQ8N1L4 340 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 RNF10Q8N5U6 811 aaKnown RBP2.71□□□□□ -1.98
CMSS1-207ENST00000494412 OR5T1Q8NG75 326 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 CIRBP-AS1Q8TBR5 109 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 DYNC2LI1Q8TCX1 351 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 CPNE4Q96A23 557 aaPredicted RBP2.71□□□□□ -1.98
CMSS1-207ENST00000494412 MRAP2Q96G30 205 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 PGLYRP3Q96LB9 341 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 TBL1YQ9BQ87 522 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 TAPBPLQ9BX59 468 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 TBL1XR1Q9BZK7 514 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 LHX5Q9H2C1 402 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 ENOPH1Q9UHY7 261 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 KIAA0232Q92628 1395 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 MYO3AQ8NEV4 1616 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 EP400Q96L91 3159 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 UTRNP46939 3433 aa2.71□□□□□ -1.98
CMSS1-207ENST00000494412 SYNMO15061 1565 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 VWDEQ8N2E2 1590 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 VWA8A3KMH1 1905 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 ZNF142P52746 1687 aaPredicted RBP2.7□□□□□ -1.98
CMSS1-207ENST00000494412 ROBO1Q9Y6N7 1651 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 CDK13Q14004 1512 aaKnown RBP2.7□□□□□ -1.98
CMSS1-207ENST00000494412 ZMYM4Q5VZL5 1548 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 LOC102724200A0A096LPH7 203 aaPredicted RBP2.7□□□□□ -1.98
CMSS1-207ENST00000494412 IGHV3-49A0A0A0MS15 119 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 A0A1W2PRG6 482 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 OR2AT4A6NND4 320 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 CENPBD1B2RD01 187 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 C9J4A7 227 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 VAMP5O95183 116 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 CTDNEP1O95476 244 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 HLA-DQB1P01920 261 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 C1GALT1C1LP0DN25 315 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 M6PRP20645 277 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 PSMB9P28065 219 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 TSPOP30536 169 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 CXCL12P48061 93 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 RAB8AP61006 207 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 PITPNAQ00169 270 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 BAXQ07812 192 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 TIMM23BQ5SRD1 257 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 CCDC122Q5T0U0 273 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 ZNF684Q5T5D7 378 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 AP1ARQ63HQ0 302 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 NANOGP8Q6NSW7 305 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 ZFP1Q6P2D0 407 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 ZFP2Q6ZN57 461 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 Q6ZR03 302 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 PRNTQ86SH4 94 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 LINC00337Q8N6G1 96 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 OR2M7Q8NG81 312 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 FAM45AQ8TCE6 357 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 DNAJB3Q8WWF6 145 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 DDIT4LQ96D03 193 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 FMC1Q96HJ9 113 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 OR10C1Q96KK4 312 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 TMEM56Q96MV1 263 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 FAM210AQ96ND0 272 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 BIRC8Q96P09 236 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 SPACA5Q96QH8 159 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 PITX2Q99697 317 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 PLEKHF2Q9H8W4 249 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 IMP3Q9NV31 184 aaKnown RBP2.7□□□□□ -1.98
CMSS1-207ENST00000494412 RBM22Q9NW64 420 aaKnown RBP eCLIP2.7□□□□□ -1.98
CMSS1-207ENST00000494412 NYAP2Q9P242 653 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 INSIG2Q9Y5U4 225 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 PHLPP1O60346 1717 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 ANKRD12Q6UB98 2062 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 RAPGEF2Q9Y4G8 1499 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 KDM5CP41229 1560 aa2.7□□□□□ -1.98
CMSS1-207ENST00000494412 CEP170BQ9Y4F5 1589 aaPredicted RBP2.7□□□□□ -1.98
CMSS1-207ENST00000494412 C9orf84Q5VXU9 1444 aa2.69□□□□□ -1.98
CMSS1-207ENST00000494412 HECW1Q76N89 1606 aa2.69□□□□□ -1.98
Retrieved 100 of 20,778 RNA–protein pairs in 42.1 ms