RNA–Protein interactions for RNA: ENST00000493886.5

VCP-207, Transcript of valosin containing protein, humanhuman

TSL 2

Gene VCP, Length 2,942 nt, Biotype retained intron, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-207ENST00000493886 MEX3AA1L020 520 aaKnown RBP11.96□□□□□ -0.5
VCP-207ENST00000493886 MFNGO00587 321 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 EFSO43281 561 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 RAD51DO75771 328 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 F12P00748 615 aaPredicted RBP11.96□□□□□ -0.5
VCP-207ENST00000493886 TBPP20226 339 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 SERPINA2P20848 420 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 RIPPLY1Q0D2K3 151 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 PNLIPRP3Q17RR3 467 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 TMEM200AQ86VY9 491 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 TUSC5Q8IXB3 177 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 S100A13Q99584 98 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 LINC00470Q9BZP3 86 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 OR2S2Q9NQN1 319 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 SLC7A10Q9NS82 523 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 MCTS1Q9ULC4 181 aaKnown RBP11.96□□□□□ -0.5
VCP-207ENST00000493886 FAM186AA6NE01 2351 aa11.96□□□□□ -0.5
VCP-207ENST00000493886 DNAJC13O75165 2243 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 KLRC4-KLRK1H3BQV0 150 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 MMP7P09237 267 aaPredicted RBP11.95□□□□□ -0.5
VCP-207ENST00000493886 TGIF1Q15583 401 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 LPCAT3Q6P1A2 487 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 CPEB3Q8NE35 698 aaKnown RBP11.95□□□□□ -0.5
VCP-207ENST00000493886 FNDC9Q8TBE3 224 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 TMED6Q8WW62 240 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 CALHM2Q9HA72 323 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 PARPBPQ9NWS1 579 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 ANAPC10Q9UM13 185 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 A0A1B0GW55 424 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 DUX4L2P0CJ85 424 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 DUX4L3P0CJ86 424 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 DUX4L4P0CJ87 422 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 DUX4L5P0CJ88 424 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 DUX4L6P0CJ89 424 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 DUX4L7P0CJ90 424 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 PRSS12P56730 875 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 NRN1LQ496H8 165 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 RRNAD1Q96FB5 475 aaKnown RBP11.95□□□□□ -0.5
VCP-207ENST00000493886 ELL3Q9HB65 397 aaPredicted RBP11.95□□□□□ -0.5
VCP-207ENST00000493886 PARD6AQ9NPB6 346 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 DUX4Q9UBX2 424 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 PURGQ9UJV8 347 aaKnown RBP11.95□□□□□ -0.5
VCP-207ENST00000493886 LHX6Q9UPM6 363 aa11.95□□□□□ -0.5
VCP-207ENST00000493886 ARFRP1Q13795 201 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 ZNF345Q14585 488 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 DEFB124Q8NES8 71 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 SPSB1Q96BD6 273 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 ST6GALNAC5Q9BVH7 336 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 PRRG4Q9BZD6 226 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 NDRG3Q9UGV2 375 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 FREM1Q5H8C1 2179 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 MSGN1A6NI15 193 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 FOXI3A8MTJ6 420 aaPredicted RBP11.94□□□□□ -0.5
VCP-207ENST00000493886 IL2RAP01589 272 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 CRHP06850 196 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 SLC25A4P12235 298 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 MTCP1P56278 107 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 ARF1P84077 181 aaKnown RBP11.94□□□□□ -0.5
VCP-207ENST00000493886 SRSF3P84103 164 aaKnown RBP11.94□□□□□ -0.5
VCP-207ENST00000493886 TMEM17Q86X19 198 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 EIF4E3Q8N5X7 224 aaKnown RBP11.94□□□□□ -0.5
VCP-207ENST00000493886 ZDHHC22Q8N966 263 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 TSNAXQ99598 290 aaKnown RBP11.94□□□□□ -0.5
VCP-207ENST00000493886 NKX6-2Q9C056 277 aaPredicted RBP11.94□□□□□ -0.5
VCP-207ENST00000493886 ZNF391Q9UJN7 358 aa11.94□□□□□ -0.5
VCP-207ENST00000493886 PSMB6P28072 239 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 BLVRBP30043 206 aaPredicted RBP11.93□□□□□ -0.5
VCP-207ENST00000493886 CLINT1Q14677 625 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 GUCA2BQ16661 112 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 C9orf135Q5VTT2 229 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 ASB13Q8WXK3 278 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 MISP3Q96FF7 219 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 OCSTAMPQ9BR26 566 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 TM2D1Q9BX74 207 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 RGCCQ9H4X1 137 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 C5orf66Q9H5L9 145 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 H0YIZ8 118 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 S100A8P05109 93 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 CNN3Q15417 329 aaKnown RBP11.93□□□□□ -0.5
VCP-207ENST00000493886 C3AR1Q16581 482 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 PNPLA5Q7Z6Z6 429 aaPredicted RBP11.93□□□□□ -0.5
VCP-207ENST00000493886 ZSCAN4Q8NAM6 433 aaPredicted RBP11.93□□□□□ -0.5
VCP-207ENST00000493886 ZFP62Q8NB50 900 aaPredicted RBP11.93□□□□□ -0.5
VCP-207ENST00000493886 BCO1Q9HAY6 547 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP11.93□□□□□ -0.5
VCP-207ENST00000493886 FRYQ5TBA9 3013 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 FAM230AA0A1W2PPH8 454 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 ZNF724A8MTY0 619 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 ZNF587BE7ETH6 402 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 RPL36A-HNRNPH2H7BZ11 118 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 DUS4LO95620 317 aaKnown RBP11.93□□□□□ -0.5
VCP-207ENST00000493886 ACTL6AO96019 429 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 TMEM225BP0DP42 221 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 CPT2P23786 658 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 FAM3AP98173 230 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 ZNF92Q03936 586 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 SLC10A1Q14973 349 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 PLEKHN1Q494U1 663 aaPredicted RBP11.93□□□□□ -0.5
VCP-207ENST00000493886 ARRDC1Q8N5I2 433 aa11.93□□□□□ -0.5
VCP-207ENST00000493886 OR5AP2Q8NGF4 316 aa11.93□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 36 ms