RNA–Protein interactions for RNA: ENST00000493682.6

COL9A1-210, Transcript of collagen type IX alpha 1 chain, humanhuman

TSL 5

Gene COL9A1, Length 1,117 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL9A1-210ENST00000493682 IL36RNQ9UBH0 155 aa13.91□□□□□ -0.18
COL9A1-210ENST00000493682 K7EIL1 84 aa13.9□□□□□ -0.18
COL9A1-210ENST00000493682 SYT7O43581 403 aa13.9□□□□□ -0.18
COL9A1-210ENST00000493682 PSPNO60542 156 aa13.9□□□□□ -0.18
COL9A1-210ENST00000493682 MMP23AO75900 390 aa13.9□□□□□ -0.18
COL9A1-210ENST00000493682 GABRR1P24046 479 aa13.9□□□□□ -0.18
COL9A1-210ENST00000493682 PEX2P28328 305 aa13.9□□□□□ -0.18
COL9A1-210ENST00000493682 SLX4IPQ5VYV7 408 aa13.9□□□□□ -0.18
COL9A1-210ENST00000493682 ZBTB49Q6ZSB9 765 aa13.9□□□□□ -0.18
COL9A1-210ENST00000493682 CCDC121Q6ZUS5 278 aa13.9□□□□□ -0.18
COL9A1-210ENST00000493682 CENPVQ7Z7K6 275 aaPredicted RBP13.9□□□□□ -0.18
COL9A1-210ENST00000493682 CATSPERDQ86XM0 798 aa13.9□□□□□ -0.18
COL9A1-210ENST00000493682 YIPF7Q8N8F6 280 aa13.9□□□□□ -0.18
COL9A1-210ENST00000493682 OR4P4Q8NGL7 312 aa13.9□□□□□ -0.18
COL9A1-210ENST00000493682 EMG1Q92979 244 aaKnown RBP13.9□□□□□ -0.18
COL9A1-210ENST00000493682 SEBOXQ9HB31 216 aaPredicted RBP13.9□□□□□ -0.18
COL9A1-210ENST00000493682 TCRBV3S1A0A5B6 114 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 TCRBV4S1A1TA0A5B7 111 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 GATBO75879 557 aaKnown RBP13.89□□□□□ -0.19
COL9A1-210ENST00000493682 KRT8P05787 483 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 CD24P25063 80 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 DUSP1P28562 367 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 EPHA2P29317 976 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 IL18R1Q13478 541 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 FLOT2Q14254 428 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 VAX1Q5SQQ9 334 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 C16orf82Q7Z2V1 217 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 Q8IYB0 196 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 ENTHD1Q8IYW4 607 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 TMEM163Q8TC26 289 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 IL4I1Q96RQ9 567 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 TBX5Q99593 518 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 CHST5Q9GZS9 411 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 LIN7BQ9HAP6 207 aa13.89□□□□□ -0.19
COL9A1-210ENST00000493682 RBFOX1Q9NWB1 397 aaKnown RBP13.89□□□□□ -0.19
COL9A1-210ENST00000493682 TSSC4Q9Y5U2 329 aaPredicted RBP13.89□□□□□ -0.19
COL9A1-210ENST00000493682 NBEAL2Q6ZNJ1 2754 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 ZAR1LA6NP61 321 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 MGST3O14880 152 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 MITFO75030 526 aaPredicted RBP13.88□□□□□ -0.19
COL9A1-210ENST00000493682 PF4P02776 101 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 NPBWR2P48146 333 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 SLC35A2P78381 396 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 ZNF91Q05481 1191 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 C12orf73Q69YU5 71 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 BAIAP2L2Q6UXY1 529 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 TRAPPC6BQ86SZ2 158 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 GID4Q8IVV7 300 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 CCDC197Q8NCU1 140 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 MYDGFQ969H8 173 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 UTP4Q969X6 686 aaKnown RBP13.88□□□□□ -0.19
COL9A1-210ENST00000493682 RNF166Q96A37 237 aaPredicted RBP13.88□□□□□ -0.19
COL9A1-210ENST00000493682 KCTD12Q96CX2 325 aaKnown RBP13.88□□□□□ -0.19
COL9A1-210ENST00000493682 BORCS8Q96FH0 119 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 AKR1E2Q96JD6 320 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 DPM3Q9P2X0 92 aa13.88□□□□□ -0.19
COL9A1-210ENST00000493682 UBE2J1Q9Y385 318 aaPredicted RBP13.88□□□□□ -0.19
COL9A1-210ENST00000493682 A0A1W2PQL4 384 aaPredicted RBP13.87□□□□□ -0.19
COL9A1-210ENST00000493682 METTL15A6NJ78 407 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 FAM107AO95990 144 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 SERPINA3P01011 423 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 LPLP06858 475 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 CALCBP10092 127 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 BCL3P20749 454 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 OR3A1P47881 315 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 P2RX3P56373 397 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 BDH1Q02338 343 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 ZNF146Q15072 292 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 ABCA11PQ4W5N1 156 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 PRAMEF5Q5TYX0 476 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 FAM58AQ8N1B3 248 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 ABHD12Q8N2K0 398 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 CCDC54Q8NEL0 328 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 CAPSLQ8WWF8 208 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 ADI1Q9BV57 179 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 KRT84Q9NSB2 600 aa13.87□□□□□ -0.19
COL9A1-210ENST00000493682 ZKSCAN7Q9P0L1 754 aaPredicted RBP13.87□□□□□ -0.19
COL9A1-210ENST00000493682 TRBV2A0A0J9YWF9 115 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 ENTPD6O75354 484 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 APOL3O95236 402 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 OR2T7P0C7T2 308 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 ERP29P30040 261 aaKnown RBP13.86□□□□□ -0.19
COL9A1-210ENST00000493682 BRS3P32247 399 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 SNU13P55769 128 aaKnown RBP13.86□□□□□ -0.19
COL9A1-210ENST00000493682 KRTAP10-11P60412 298 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 C11orf87Q6NUJ2 197 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 C10orf99Q6UWK7 81 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 RTN4RL2Q86UN3 420 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 PRSS35Q8N3Z0 413 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 DNAAF1Q8NEP3 725 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 OR4X2Q8NGF9 303 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 STMN2Q93045 179 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 C10orf35Q96D05 121 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 RCC1LQ96I51 464 aaKnown RBP13.86□□□□□ -0.19
COL9A1-210ENST00000493682 SLC25A33Q9BSK2 321 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 INPP5EQ9NRR6 644 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 WARS2Q9UGM6 360 aaKnown RBP13.86□□□□□ -0.19
COL9A1-210ENST00000493682 POMPQ9Y244 141 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 COL7A1Q02388 2944 aa13.86□□□□□ -0.19
COL9A1-210ENST00000493682 IGKV1-9A0A0C4DH69 117 aa13.85□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 41.1 ms