RNA–Protein interactions for RNA: ENST00000492859.5

BRCA1-220, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 1,584 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-220ENST00000492859 RGNQ15493 299 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 MORN2Q502X0 79 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 DCAF12Q5T6F0 453 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 SPATA31B1PQ5VZV4 182 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 HSD11B1LQ7Z5J1 315 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 SLC35E3Q7Z769 313 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 RBM23Q86U06 439 aaKnown RBP3.56□□□□□ -1.84
BRCA1-220ENST00000492859 SFTPA2Q8IWL1 248 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 PGBD5Q8N414 524 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 SCCPDHQ8NBX0 429 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 OR51A2Q8NGJ7 313 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 OR10G7Q8NGN6 311 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 OR13C8Q8NGS7 320 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 THEM6Q8WUY1 208 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 SECTM1Q8WVN6 248 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 GPR146Q96CH1 333 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 ISOC1Q96CN7 298 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 KAZALD1Q96I82 304 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 TMEM101Q96IK0 257 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 HSFY1Q96LI6 401 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 TEX37Q96LM6 180 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 UBE2E2Q96LR5 201 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 IP6K3Q96PC2 410 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 RNF157Q96PX1 679 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 OR52B2Q96RD2 323 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 MGLLQ99685 303 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 NRIP2Q9BQI9 281 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 DCTN5Q9BTE1 182 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 APOOQ9BUR5 198 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 TMEM59Q9BXS4 323 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 HES7Q9BYE0 225 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 RNASE7Q9H1E1 156 aaKnown RBP3.56□□□□□ -1.84
BRCA1-220ENST00000492859 ELL3Q9HB65 397 aaPredicted RBP3.56□□□□□ -1.84
BRCA1-220ENST00000492859 TAF9BQ9HBM6 251 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 ACKR4Q9NPB9 350 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 GPR84Q9NQS5 396 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 DLL4Q9NR61 685 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 MBNL3Q9NUK0 354 aaKnown RBP3.56□□□□□ -1.84
BRCA1-220ENST00000492859 UQCC1Q9NVA1 299 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 RNF186Q9NXI6 227 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 SLC23A2Q9UGH3 650 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 ASF1AQ9Y294 204 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 PPP2R2CQ9Y2T4 447 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 CHST2Q9Y4C5 530 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 WIPI2Q9Y4P8 454 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 SPIN1Q9Y657 262 aaPredicted RBP3.56□□□□□ -1.84
BRCA1-220ENST00000492859 MLH3Q9UHC1 1453 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 ZC3H13Q5T200 1668 aaKnown RBP3.56□□□□□ -1.84
BRCA1-220ENST00000492859 TDRD15B5MCY1 1934 aaKnown RBP3.56□□□□□ -1.84
BRCA1-220ENST00000492859 NCKAP5O14513 1909 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 SIGLEC1Q9BZZ2 1709 aa3.56□□□□□ -1.84
BRCA1-220ENST00000492859 TRAV38-1A0A0B4J264 116 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 SPAARA0A1B0GVQ0 90 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 INMT-MINDY4F8WBC2 141 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 UPK1AO00322 258 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF593O00488 134 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 RNASET2O00584 256 aaKnown RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ARPC2O15144 300 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 FKBP6O75344 327 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 SOX14O95416 240 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 TBX6O95947 436 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 SERPINE1P05121 402 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 HLA-DOAP06340 250 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 CELA2AP08217 269 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 SLC2A2P11168 524 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF708P17019 499 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ORM2P19652 201 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 CDK2P24941 298 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 BLVRBP30043 206 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 EMP1P54849 157 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 FBXW4P57775 412 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 RPL27P61353 136 aaKnown RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 DCDP81605 110 aaKnown RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 MEF2CQ06413 473 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 FAM27E3Q08E93 113 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 CLINT1Q14677 625 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 PAFAH1B3Q15102 231 aaKnown RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 RAB35Q15286 201 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 SIX1Q15475 284 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 TMEM241Q24JQ0 296 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF284Q2VY69 593 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 ZNF404Q494X3 552 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 TIGITQ495A1 244 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 FBXW12Q6X9E4 464 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 Q6ZSR6 202 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 C17orf64Q86WR6 236 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 HOGA1Q86XE5 327 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 PAQR4Q8N4S7 273 aaPredicted RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 TCTEX1D1Q8N7M0 179 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 LRRC57Q8N9N7 239 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 OR7A2PQ8NGA2 310 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 OR4K17Q8NGC6 315 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 OR5P3Q8WZ94 311 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 TFAP2CQ92754 450 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 DCUN1D1Q96GG9 259 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 PGLYRP3Q96LB9 341 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 MRPL57Q9BQC6 102 aaKnown RBP3.55□□□□□ -1.84
BRCA1-220ENST00000492859 SLC29A3Q9BZD2 475 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 NPFFR1Q9GZQ6 430 aa3.55□□□□□ -1.84
BRCA1-220ENST00000492859 OR51I2Q9H344 312 aa3.55□□□□□ -1.84
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms