RNA–Protein interactions for RNA: ENST00000491330.1

PDLIM2-217, Transcript of PDZ and LIM domain 2, humanhuman

TSL 3

Gene PDLIM2, Length 563 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM2-217ENST00000491330 GABRA5P31644 462 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 ARHGDIBP52566 201 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 OR12D2P58182 307 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 ERVK11-1P61568 191 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 CCDC58Q4VC31 144 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 SPIN3Q5JUX0 258 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 OR8H2Q8N162 312 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 PRSS35Q8N3Z0 413 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 OR5D14Q8NGL3 314 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 FGGYQ96C11 551 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 NPFFR1Q9GZQ6 430 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 MEGF9Q9H1U4 602 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 SEBOXQ9HB31 216 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 FGF20Q9NP95 211 aaPredicted RBP13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 ERVK13-1Q9NX77 482 aa13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 TBL2Q9Y4P3 447 aaKnown RBP13.53□□□□□ -0.24
PDLIM2-217ENST00000491330 TSPAN9O75954 239 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 ALX3O95076 343 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 AZGP1P25311 298 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 CEBPDP49716 269 aaPredicted RBP13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 GBX2P52951 348 aaPredicted RBP13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 RELBQ01201 579 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 PRB3Q04118 309 aaPredicted RBP13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 DYNC1I2Q13409 638 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 ALKBH1Q13686 389 aaKnown RBP13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 GRK1Q15835 563 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 TAF9Q16594 264 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 OGFRL1Q5TC84 451 aaPredicted RBP13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 TMPRSS11AQ6ZMR5 421 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 Q6ZTK2 550 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 TRAPPC6BQ86SZ2 158 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 FAM58AQ8N1B3 248 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 BATF2Q8N1L9 274 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 PNKDQ8N490 385 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 OR2T6Q8NHC8 308 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 PELI1Q96FA3 418 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 C4orf36Q96KX1 117 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 ZNF714Q96N38 554 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 CITED1Q99966 193 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 MTCH1Q9NZJ7 389 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 FRRS1LQ9P0K9 344 aa13.52□□□□□ -0.25
PDLIM2-217ENST00000491330 CLPXO76031 633 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 HAND1O96004 215 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 MT-ND2P03891 347 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 PRKACAP17612 351 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 BMXP51813 675 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 EDDM3AQ14507 147 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 OR52W1Q6IF63 320 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 Q6ZSV7 163 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 SERPINA12Q8IW75 414 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 RDH10Q8IZV5 341 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 APH1BQ8WW43 257 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 TAF15Q92804 592 aaKnown RBP eCLIP13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 MALSU1Q96EH3 234 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 OPALINQ96PE5 141 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 CDCA4Q9BXL8 241 aa13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 EXOSC4Q9NPD3 245 aaKnown RBP13.51□□□□□ -0.25
PDLIM2-217ENST00000491330 TRBV2A0A0J9YWF9 115 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 H0YJX3 145 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 MGST3O14880 152 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 PEX14O75381 377 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 ARG1P05089 322 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 CD2P06729 351 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 HCKP08631 526 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 MYL12AP19105 171 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 KIR3DL2P43630 455 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 ADARB1P78563 741 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 ARSJQ5FYB0 599 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 ZNF782Q6ZMW2 699 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 C8orf59Q8N0T1 100 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 OR52I1Q8NGK6 324 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 RPS4Y2Q8TD47 263 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 TSEN15Q8WW01 171 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 CAPSLQ8WWF8 208 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 CYGBQ8WWM9 190 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 RNF166Q96A37 237 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 MMP27Q9H306 513 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 GAL3ST2Q9H3Q3 398 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 ZCCHC4Q9H5U6 513 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 RANBP3Q9H6Z4 567 aaPredicted RBP13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 CHCHD3Q9NX63 227 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 FBLN5Q9UBX5 448 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 DHDHQ9UQ10 334 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 EXOSC1Q9Y3B2 195 aaKnown RBP13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 LINC00312Q9Y6C7 94 aa13.5□□□□□ -0.25
PDLIM2-217ENST00000491330 TRGV10A0A0A0MS01 117 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 OR4C45A6NMZ5 311 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 C17orf98A8MV24 154 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 WBP4O75554 376 aaKnown RBP13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 CCL3L1P16619 93 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 CAPGP40121 348 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 DLX1P56177 255 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 PDZK1IP1Q13113 114 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 ZNF146Q15072 292 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 LY6EQ16553 131 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 LRRC36Q1X8D7 754 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 C2orf68Q2NKX9 166 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 SLC35E4Q6ICL7 350 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 LHFPL3Q86UP9 236 aa13.49□□□□□ -0.25
PDLIM2-217ENST00000491330 SAXO1Q8IYX7 474 aa13.49□□□□□ -0.25
Retrieved 100 of 20,778 RNA–protein pairs in 63.1 ms