RNA–Protein interactions for RNA: ENST00000490993.5

NPHP3-208, Transcript of nephrocystin 3, humanhuman

TSL 5

Gene NPHP3, Length 5,197 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NPHP3-208ENST00000490993 CCL2P13500 99 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 ZBTB25P24278 435 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 RAB5CP51148 216 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 H3F3AP84243 136 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 IFITM2Q01629 132 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 FOXO1Q12778 655 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 IL13RA2Q14627 380 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 HIST3H3Q16695 136 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 SPATA46Q5T0L3 261 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 GPR157Q5UAW9 335 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 UQCC3Q6UW78 93 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 BATF2Q8N1L9 274 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 OR1K1Q8NGR3 316 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 NTNG2Q96CW9 530 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 Q96M66 194 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 MESP1Q9BRJ9 268 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 C1QTNF6Q9BXI9 259 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 GNG12Q9UBI6 72 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 IL17BQ9UHF5 180 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 GPR132Q9UNW8 380 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 LAMP3Q9UQV4 416 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 CABIN1Q9Y6J0 2220 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 MASP2O00187 686 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 KLK10O43240 276 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 BCL3P20749 454 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 UBE2V2Q15819 145 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 C3AR1Q16581 482 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 PCNPQ8WW12 178 aaKnown RBP6.39□□□□□ -1.39
NPHP3-208ENST00000490993 BOD1Q96IK1 185 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 NPAS1Q99742 590 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 CNTNAP3Q9BZ76 1288 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 TAAR3PQ9P1P4 343 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 FBXO7Q9Y3I1 522 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 AHRRA9YTQ3 701 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 M0R1B8 84 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 SDHBP21912 280 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 MPZP25189 248 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 FAM3AP98173 230 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 TLE4Q04727 773 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 UNC119Q13432 240 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 FAM214BQ7L5A3 538 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 SLC36A1Q7Z2H8 476 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 GNPNAT1Q96EK6 184 aaPredicted RBP6.39□□□□□ -1.39
NPHP3-208ENST00000490993 SIGLEC12Q96PQ1 595 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 EGLN1Q9GZT9 426 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 FN3KRPQ9HA64 309 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 FOXD3Q9UJU5 478 aaPredicted RBP6.39□□□□□ -1.39
NPHP3-208ENST00000490993 PRELID3BQ9Y3B1 194 aa6.39□□□□□ -1.39
NPHP3-208ENST00000490993 C3orf85A0A1B0GTC6 90 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 MFNGO00587 321 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 HOXD4P09016 255 aaPredicted RBP6.38□□□□□ -1.39
NPHP3-208ENST00000490993 FGF12P61328 243 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 VHLLQ6RSH7 139 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 BHLHA15Q7RTS1 189 aaPredicted RBP6.38□□□□□ -1.39
NPHP3-208ENST00000490993 TMPRSS7Q7RTY8 843 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 MDP1Q86V88 176 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 GCNT2Q8N0V5 402 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 WNT2BQ93097 391 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 GALMQ96C23 342 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 NPTNQ9Y639 398 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 SPTBP11277 2137 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 DOCK9Q9BZ29 2069 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 A0A0G2JMM0 328 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 A0A1W2PPB8 328 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 A0A1W2PRS3 328 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 KIR3DP1A8MWS1 328 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 LYZL6O75951 148 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 CST4P01036 141 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 FCGR3AP08637 254 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 CHATP28329 748 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 HIKESHIQ53FT3 197 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 GGNBP1Q5YKI7 109 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 H3F3CQ6NXT2 135 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 SSX8Q7RTT4 187 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 MRPL41Q8IXM3 137 aaKnown RBP6.38□□□□□ -1.39
NPHP3-208ENST00000490993 ADAD2Q8NCV1 583 aaKnown RBP6.38□□□□□ -1.39
NPHP3-208ENST00000490993 CPEB3Q8NE35 698 aaKnown RBP6.38□□□□□ -1.39
NPHP3-208ENST00000490993 OR10S1Q8NGN2 331 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 KCNJ16Q9NPI9 418 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 IL36GQ9NZH8 169 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 LRRC3CA6NJW4 275 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 ZNF716A6NP11 495 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 LGALS8O00214 317 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 SRSF10O75494 262 aaKnown RBP6.38□□□□□ -1.39
NPHP3-208ENST00000490993 FAM166AQ6J272 317 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 FOXL2NBQ6ZUU3 175 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 EDARADDQ8WWZ3 215 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 USB1Q9BQ65 265 aaKnown RBP6.38□□□□□ -1.39
NPHP3-208ENST00000490993 PKIBQ9C010 78 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 DYNLRB1Q9NP97 96 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 CEBPZOSA8MTT3 80 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 PRR33A8MZF0 331 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 NAT2P11245 290 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 FABP6P51161 128 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 MECP2P51608 486 aaKnown RBP6.38□□□□□ -1.39
NPHP3-208ENST00000490993 RAB31Q13636 194 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 PHYHD1Q5SRE7 291 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 C1QTNF5Q9BXJ0 243 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 HES7Q9BYE0 225 aa6.38□□□□□ -1.39
NPHP3-208ENST00000490993 WDR13Q9H1Z4 485 aa6.38□□□□□ -1.39
Retrieved 100 of 20,778 RNA–protein pairs in 31.5 ms