RNA–Protein interactions for RNA: ENST00000488727.5

CCM2-216, Transcript of CCM2 scaffold protein, humanhuman

TSL 5

Gene CCM2, Length 1,719 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCM2-216ENST00000488727 UBE2QL1A1L167 161 aa16.46■□□□□ 0.23
CCM2-216ENST00000488727 CYB5AP00167 134 aa16.46■□□□□ 0.23
CCM2-216ENST00000488727 MPZP25189 248 aa16.46■□□□□ 0.23
CCM2-216ENST00000488727 RAP2BP61225 183 aa16.46■□□□□ 0.23
CCM2-216ENST00000488727 DHODHQ02127 395 aa16.46■□□□□ 0.23
CCM2-216ENST00000488727 AWAT2Q6E213 333 aa16.46■□□□□ 0.23
CCM2-216ENST00000488727 OR2T35Q8NGX2 323 aa16.46■□□□□ 0.23
CCM2-216ENST00000488727 REEP6Q96HR9 211 aa16.46■□□□□ 0.23
CCM2-216ENST00000488727 FAM71F1Q96KD3 344 aaPredicted RBP16.46■□□□□ 0.23
CCM2-216ENST00000488727 PIPOXQ9P0Z9 390 aa16.46■□□□□ 0.23
CCM2-216ENST00000488727 PURGQ9UJV8 347 aaKnown RBP16.46■□□□□ 0.23
CCM2-216ENST00000488727 V9GYS6 101 aa16.46■□□□□ 0.23
CCM2-216ENST00000488727 USF3Q68DE3 2245 aa16.46■□□□□ 0.23
CCM2-216ENST00000488727 TMEM235A6NFC5 223 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 OVOL3O00110 214 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 ALX3O95076 343 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 CHRM2P08172 466 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 ZNF735P0CB33 412 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 UBBP0CG47 229 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 KITLGP21583 273 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 ALDH3B1P43353 468 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 SELENOVP59797 346 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 MEF2DQ14814 521 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 ZMYND11Q15326 602 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 OR2T2Q6IF00 324 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 MRPL21Q7Z2W9 205 aaKnown RBP16.45■□□□□ 0.22
CCM2-216ENST00000488727 ANGPTL5Q86XS5 388 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 OR8S1Q8NH09 359 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 GTF3AQ92664 365 aaKnown RBP16.45■□□□□ 0.22
CCM2-216ENST00000488727 DVL3Q92997 716 aaPredicted RBP16.45■□□□□ 0.22
CCM2-216ENST00000488727 C1orf147Q96MC9 270 aaPredicted RBP16.45■□□□□ 0.22
CCM2-216ENST00000488727 GAL3ST1Q99999 423 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 TMEM165Q9HC07 324 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 SLC2A8Q9NY64 477 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 TAAR3PQ9P1P4 343 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 MRPS28Q9Y2Q9 187 aaKnown RBP16.45■□□□□ 0.22
CCM2-216ENST00000488727 CSMD1Q96PZ7 3565 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 ZNF736B4DX44 427 aaPredicted RBP16.45■□□□□ 0.22
CCM2-216ENST00000488727 LILRA1O75019 489 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 SNAPC5O75971 98 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 CDKN1AP38936 164 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 FAM189A2Q15884 450 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 ZCCHC24Q8N2G6 241 aaKnown RBP16.45■□□□□ 0.22
CCM2-216ENST00000488727 CCDC107Q8WV48 283 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 C10orf35Q96D05 121 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 SLC23A1Q9UHI7 598 aa16.45■□□□□ 0.22
CCM2-216ENST00000488727 hCG_38984A0A1B0GV85 526 aa16.44■□□□□ 0.22
CCM2-216ENST00000488727 M0R233 179 aa16.44■□□□□ 0.22
CCM2-216ENST00000488727 TIMM8AO60220 97 aaPredicted RBP16.44■□□□□ 0.22
CCM2-216ENST00000488727 RLN1P04808 185 aa16.44■□□□□ 0.22
CCM2-216ENST00000488727 FAM3AP98173 230 aa16.44■□□□□ 0.22
CCM2-216ENST00000488727 BHLHE23Q8NDY6 225 aa16.44■□□□□ 0.22
CCM2-216ENST00000488727 OR10R2Q8NGX6 335 aa16.44■□□□□ 0.22
CCM2-216ENST00000488727 ASB13Q8WXK3 278 aa16.44■□□□□ 0.22
CCM2-216ENST00000488727 TMPRSS13Q9BYE2 586 aa16.44■□□□□ 0.22
CCM2-216ENST00000488727 TINAGL1Q9GZM7 467 aaPredicted RBP16.44■□□□□ 0.22
CCM2-216ENST00000488727 RGCCQ9H4X1 137 aa16.44■□□□□ 0.22
CCM2-216ENST00000488727 ELF5Q9UKW6 265 aaPredicted RBP16.44■□□□□ 0.22
CCM2-216ENST00000488727 CYSRT1A8MQ03 144 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 DHRS3O75911 302 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 NAT2P11245 290 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 NKPD1Q17RQ9 610 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 LGALSLQ3ZCW2 172 aaPredicted RBP16.43■□□□□ 0.22
CCM2-216ENST00000488727 CDNFQ49AH0 187 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 GLIPR1L1Q6UWM5 242 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 TRAPPC6BQ86SZ2 158 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 OR52B4Q8NGK2 314 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 KCNG3Q8TAE7 436 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 SNAPC3Q92966 411 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 PIGTQ969N2 578 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 LPAR5Q9H1C0 372 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 OPA3Q9H6K4 179 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 ANAPC10Q9UM13 185 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 NAV2Q8IVL1 2488 aa16.43■□□□□ 0.22
CCM2-216ENST00000488727 IQCF6A8MYZ5 107 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 DISC1C4P0D8 188 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 AMY2AP04746 511 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 TBPP20226 339 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 RIPPLY1Q0D2K3 151 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 IKZF1Q13422 519 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 MPPED2Q15777 294 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 IDO2Q6ZQW0 420 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 Q6ZR03 302 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 OR56B2PQ8NGI1 322 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 PP6455Q8WZ26 134 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 HEXA-AS1Q9H8Q6 139 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 ZMAT3Q9HA38 289 aaKnown RBP16.42■□□□□ 0.22
CCM2-216ENST00000488727 MSL2Q9HCI7 577 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 DYNLRB1Q9NP97 96 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 GHRLQ9UBU3 117 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 IGKV1-9A0A0C4DH69 117 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 TMEM82A0PJX8 343 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 ZSCAN5BA6NJL1 495 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 CD300LBA8K4G0 201 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 M0QYG6 137 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 CDC14BO60729 498 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 HCKP08631 526 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 GSTP1P09211 210 aaKnown RBP16.42■□□□□ 0.22
CCM2-216ENST00000488727 ACKR3P25106 362 aa16.42■□□□□ 0.22
CCM2-216ENST00000488727 HTR2BP41595 481 aa16.42■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms