RNA–Protein interactions for RNA: ENST00000488426.5

NELFE-209, Transcript of negative elongation factor complex member E, humanhuman

TSL 5

Gene NELFE, Length 1,855 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NELFE-209ENST00000488426 PPP3CBP16298 524 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 MPZP25189 248 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 RBM11P57052 281 aaKnown RBP10.83□□□□□ -0.68
NELFE-209ENST00000488426 TLE4Q04727 773 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 IL24Q13007 206 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 NHLRC3Q5JS37 347 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 RGS7BPQ6MZT1 257 aaPredicted RBP10.83□□□□□ -0.68
NELFE-209ENST00000488426 OR4C16Q8NGL9 310 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 NUDCD2Q8WVJ2 157 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 ST8SIA4Q92187 359 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 NRGNQ92686 78 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 OR51I2Q9H344 312 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 RHOFQ9HBH0 211 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 IFT46Q9NQC8 304 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 NUDT15Q9NV35 164 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 MCUBQ9NWR8 336 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 ANAPC10Q9UM13 185 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP10.83□□□□□ -0.68
NELFE-209ENST00000488426 TMEM210A6NLX4 147 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 ZNF736B4DX44 427 aaPredicted RBP10.83□□□□□ -0.68
NELFE-209ENST00000488426 TRAPPC2LH3BP13 241 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 J3QT63 122 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 SSX5O60225 188 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 CD74P04233 296 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 CD3DP04234 171 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 TBPP20226 339 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 GABRR1P24046 479 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 CCR6P51684 374 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 FGF12P61328 243 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 RPS23P62266 143 aaKnown RBP10.83□□□□□ -0.68
NELFE-209ENST00000488426 OR8G1Q15617 311 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 TATDN3Q17R31 274 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 FAM76BQ5HYJ3 339 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 HAGHLQ6PII5 290 aaPredicted RBP10.83□□□□□ -0.68
NELFE-209ENST00000488426 FBXL14Q8N1E6 418 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 HPS1Q92902 700 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 OCSTAMPQ9BR26 566 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 TMEM100Q9NV29 134 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 ST3GAL6Q9Y274 331 aa10.83□□□□□ -0.68
NELFE-209ENST00000488426 HEATR1Q9H583 2144 aaKnown RBP10.82□□□□□ -0.68
NELFE-209ENST00000488426 A0A0B4J293 547 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 A0A1B0GWJ7 208 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 TIMM8AO60220 97 aaPredicted RBP10.82□□□□□ -0.68
NELFE-209ENST00000488426 RAB3DO95716 219 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 DHFRP00374 187 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 GLRXP35754 106 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 ASCL1P50553 236 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 NKX6-1P78426 367 aaPredicted RBP10.82□□□□□ -0.68
NELFE-209ENST00000488426 ARFRP1Q13795 201 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 MEF2DQ14814 521 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 TAF9Q16594 264 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 ALKBH6Q3KRA9 238 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 SFRP4Q6FHJ7 346 aaPredicted RBP10.82□□□□□ -0.68
NELFE-209ENST00000488426 TMEM108Q6UXF1 575 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 RTN4RL2Q86UN3 420 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 OR56B4Q8NH76 319 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 SUN5Q8TC36 379 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 GIMAP1Q8WWP7 306 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 SLAMF9Q96A28 289 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 PLK3Q9H4B4 646 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 PLEKHJ1Q9NW61 149 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 NKIRAS2Q9NYR9 191 aa10.82□□□□□ -0.68
NELFE-209ENST00000488426 HIVEP1P15822 2718 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 ANKRD17O75179 2603 aaKnown RBP10.81□□□□□ -0.68
NELFE-209ENST00000488426 H3BUI4 141 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 H2AFB2P0C5Z0 115 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 ZNF250P15622 560 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 M6PRP20645 277 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 BCL3P20749 454 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 CD40P25942 277 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 CHATP28329 748 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 NPBWR2P48146 333 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 FABP6P51161 128 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 PIGYQ3MUY2 71 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 ALKBH2Q6NS38 261 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 FAAP20Q6NZ36 180 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 ZNF782Q6ZMW2 699 aaPredicted RBP10.81□□□□□ -0.68
NELFE-209ENST00000488426 LINC00596Q86U02 117 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 C20orf85Q9H1P6 137 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 MTCH1Q9NZJ7 389 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 TMA7Q9Y2S6 64 aaKnown RBP10.81□□□□□ -0.68
NELFE-209ENST00000488426 POLDIP2Q9Y2S7 368 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 PRR14LQ5THK1 2151 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 F8P00451 2351 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 GEMIN2O14893 280 aaKnown RBP10.81□□□□□ -0.68
NELFE-209ENST00000488426 SYNGR1O43759 233 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 PDCD6O75340 191 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 NDUFB6O95139 128 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 CRYZL1O95825 349 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 TRAPPC2P0DI81 140 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 TRAPPC2BP0DI82 140 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 PTAFRP25105 342 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 HLA-DMAP28067 261 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 PMELP40967 661 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 MZT1Q08AG7 82 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 RBMS2Q15434 407 aaKnown RBP10.81□□□□□ -0.68
NELFE-209ENST00000488426 MPV17LQ2QL34 196 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 FBXL19-AS1Q494R0 122 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 ACTBL2Q562R1 376 aa10.81□□□□□ -0.68
NELFE-209ENST00000488426 C6orf201Q7Z4U5 140 aa10.81□□□□□ -0.68
Retrieved 100 of 20,778 RNA–protein pairs in 29.9 ms