RNA–Protein interactions for RNA: ENST00000488279.6

PTPN4-211, Transcript of protein tyrosine phosphatase, non-receptor type 4, humanhuman

TSL 5

Gene PTPN4, Length 662 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPN4-211ENST00000488279 OCMP0CE72 109 aaPredicted RBP18.28■□□□□ 0.52
PTPN4-211ENST00000488279 ZNF20P17024 532 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 ATF1P18846 271 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 NPBWR2P48146 333 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 RAB13P51153 203 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 OR12D2P58182 307 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 DYNC1I2Q13409 638 aaKnown RBP18.28■□□□□ 0.52
PTPN4-211ENST00000488279 GRK1Q15835 563 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 FAM189A2Q15884 450 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 SSX2Q16385 188 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 ZNF626Q68DY1 528 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 FDX2Q6P4F2 183 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 DYNAPQ8N1N2 210 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 NKX3-1Q99801 234 aaPredicted RBP18.28■□□□□ 0.52
PTPN4-211ENST00000488279 FOXJ3Q9UPW0 622 aa18.28■□□□□ 0.52
PTPN4-211ENST00000488279 TRBV2A0A0J9YWF9 115 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 EI24O14681 340 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 IGHA1P01876 353 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 BCL3P20749 454 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 AZGP1P25311 298 aaKnown RBP18.27■□□□□ 0.52
PTPN4-211ENST00000488279 DUSP1P28562 367 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 POU3F4P49335 361 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 ZNF146Q15072 292 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 ZIK1Q3SY52 487 aaPredicted RBP18.27■□□□□ 0.52
PTPN4-211ENST00000488279 LHFPL2Q6ZUX7 228 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 ACBD7Q8N6N7 88 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 KLHDC1Q8N7A1 406 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 OR52N4Q8NGI2 321 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 RPS4Y2Q8TD47 263 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 SPSB1Q96BD6 273 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 CHST6Q9GZX3 395 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 IL36RNQ9UBH0 155 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 TCF19Q9Y242 345 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 LINC00312Q9Y6C7 94 aa18.27■□□□□ 0.52
PTPN4-211ENST00000488279 J3QLW9 94 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 HTR1AP08908 422 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 ZNF19P17023 458 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 PRKACAP17612 351 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 ALDH3A2P51648 485 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 CCR9P51686 369 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 NANOS3P60323 173 aaKnown RBP18.26■□□□□ 0.51
PTPN4-211ENST00000488279 ACTA2P62736 377 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 ACTG2P63267 376 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 ZNF91Q05481 1191 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 PDZK1IP1Q13113 114 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 SPIN3Q5JUX0 258 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 TCF23Q7RTU1 214 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 ZNF676Q8N7Q3 588 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 MBOAT4Q96T53 435 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 MYCBPQ99417 103 aaPredicted RBP18.26■□□□□ 0.51
PTPN4-211ENST00000488279 PITPNC1Q9UKF7 332 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 HHLA2Q9UM44 414 aa18.26■□□□□ 0.51
PTPN4-211ENST00000488279 MGST3O14880 152 aa18.25■□□□□ 0.51
PTPN4-211ENST00000488279 PSPNO60542 156 aa18.25■□□□□ 0.51
PTPN4-211ENST00000488279 VSIG10L2P0DP72 767 aa18.25■□□□□ 0.51
PTPN4-211ENST00000488279 CALCBP10092 127 aa18.25■□□□□ 0.51
PTPN4-211ENST00000488279 ZFP1Q6P2D0 407 aa18.25■□□□□ 0.51
PTPN4-211ENST00000488279 TPRX1Q8N7U7 411 aa18.25■□□□□ 0.51
PTPN4-211ENST00000488279 C11orf44Q8N8P7 122 aa18.25■□□□□ 0.51
PTPN4-211ENST00000488279 CFHR4Q92496 578 aa18.25■□□□□ 0.51
PTPN4-211ENST00000488279 MRPL48Q96GC5 212 aaKnown RBP18.25■□□□□ 0.51
PTPN4-211ENST00000488279 OPALINQ96PE5 141 aa18.25■□□□□ 0.51
PTPN4-211ENST00000488279 EXOGQ9Y2C4 368 aaKnown RBP18.25■□□□□ 0.51
PTPN4-211ENST00000488279 SESN1Q9Y6P5 492 aa18.25■□□□□ 0.51
PTPN4-211ENST00000488279 MEGF11A6BM72 1044 aa18.24■□□□□ 0.51
PTPN4-211ENST00000488279 SH2D1BO14796 132 aa18.24■□□□□ 0.51
PTPN4-211ENST00000488279 ERP29P30040 261 aaKnown RBP18.24■□□□□ 0.51
PTPN4-211ENST00000488279 SNU13P55769 128 aaKnown RBP18.24■□□□□ 0.51
PTPN4-211ENST00000488279 KPNB1Q14974 876 aaKnown RBP18.24■□□□□ 0.51
PTPN4-211ENST00000488279 LDLRAD2Q5SZI1 272 aa18.24■□□□□ 0.51
PTPN4-211ENST00000488279 MINOS1Q5TGZ0 78 aa18.24■□□□□ 0.51
PTPN4-211ENST00000488279 CCBE1Q6UXH8 406 aaPredicted RBP18.24■□□□□ 0.51
PTPN4-211ENST00000488279 ZBTB49Q6ZSB9 765 aa18.24■□□□□ 0.51
PTPN4-211ENST00000488279 OR4S1Q8NGB4 309 aa18.24■□□□□ 0.51
PTPN4-211ENST00000488279 OR13C3Q8NGS6 347 aa18.24■□□□□ 0.51
PTPN4-211ENST00000488279 C4orf36Q96KX1 117 aa18.24■□□□□ 0.51
PTPN4-211ENST00000488279 HMG20AQ9NP66 347 aa18.24■□□□□ 0.51
PTPN4-211ENST00000488279 MINOS1-NBL1R4GNA1 71 aa18.24■□□□□ 0.51
PTPN4-211ENST00000488279 A6NDX4 124 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 H3BNX3 289 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 DYNLT3P51808 116 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 TRAPPC6BQ86SZ2 158 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 TMEM219Q86XT9 240 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 CBR4Q8N4T8 237 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 OR51A4Q8NGJ6 313 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 RFT1Q96AA3 541 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 PELI1Q96FA3 418 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 TMEM133Q9H2Q1 129 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 NEK6Q9HC98 313 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 EXOSC4Q9NPD3 245 aaKnown RBP18.23■□□□□ 0.51
PTPN4-211ENST00000488279 GSTK1Q9Y2Q3 226 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 UBE2J1Q9Y385 318 aaPredicted RBP18.23■□□□□ 0.51
PTPN4-211ENST00000488279 PCDHGB5Q9Y5G0 923 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 HILPDAQ9Y5L2 63 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 GMPPBQ9Y5P6 360 aa18.23■□□□□ 0.51
PTPN4-211ENST00000488279 IGHV2-26A0A0B4J1V2 119 aa18.22■□□□□ 0.51
PTPN4-211ENST00000488279 OR4C45A6NMZ5 311 aa18.22■□□□□ 0.51
PTPN4-211ENST00000488279 E9PQ18 207 aa18.22■□□□□ 0.51
PTPN4-211ENST00000488279 H3BUI4 141 aa18.22■□□□□ 0.51
PTPN4-211ENST00000488279 MT-ND2P03891 347 aa18.22■□□□□ 0.51
Retrieved 100 of 20,778 RNA–protein pairs in 449.5 ms