RNA–Protein interactions for RNA: ENST00000487825.5

BRCA1-217, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 800 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-217ENST00000487825 OR56B2PQ8NGI1 322 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 OR4Q3Q8NH05 313 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 OR6X1Q8NH79 312 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 TSEN15Q8WW01 171 aaKnown RBP3.42□□□□□ -1.86
BRCA1-217ENST00000487825 OR5P2Q8WZ92 322 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 SLAMF9Q96A28 289 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 ROPN1LQ96C74 230 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 CMBLQ96DG6 245 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 SLC35G5Q96KT7 338 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 RBM14Q96PK6 669 aaKnown RBP3.42□□□□□ -1.86
BRCA1-217ENST00000487825 TSSK3Q96PN8 268 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 NABP2Q9BQ15 211 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 ECSITQ9BQ95 431 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 YY1AP1Q9H869 796 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 CCNB1IP1Q9NPC3 277 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 NDE1Q9NXR1 346 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 VNN3Q9NY84 501 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 ATP6V1HQ9UI12 483 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 PRPF19Q9UMS4 504 aaKnown RBP3.42□□□□□ -1.86
BRCA1-217ENST00000487825 STK38LQ9Y2H1 464 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 N6AMT1Q9Y5N5 214 aa3.42□□□□□ -1.86
BRCA1-217ENST00000487825 TRAV34A0A0B4J273 112 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 PSMB11A5LHX3 300 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 A8MT66 165 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 L7N2F9 121 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 POLR3GO15318 223 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-217ENST00000487825 SUPT7LO94864 414 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 SNRPAP09012 282 aaKnown RBP3.41□□□□□ -1.86
BRCA1-217ENST00000487825 GKN3PP0CG01 181 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 RBMY1A1P0DJD3 496 aaKnown RBP3.41□□□□□ -1.86
BRCA1-217ENST00000487825 PGA4P0DJD7 388 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 PGA3P0DJD8 388 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 SPNP16150 400 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 MPZP25189 248 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 AZGP1P25311 298 aaKnown RBP3.41□□□□□ -1.86
BRCA1-217ENST00000487825 FASP25445 335 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 CD200P41217 278 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 MAGEA4P43358 317 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 DYNLT3P51808 116 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 ZNF75DP51815 510 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 PKNOX1P55347 436 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 COPZ1P61923 177 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 ERVK-25P63136 954 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 HBA1P69905 142 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 HPCAP84074 193 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 SCN1BQ07699 218 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 NAB1Q13506 487 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 PCLAFQ15004 111 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 MPPED2Q15777 294 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 HIST3H3Q16695 136 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 DEFB136Q30KP8 78 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 UNC50Q53HI1 259 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 ZNF678Q5SXM1 525 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 ATAD3BQ5T9A4 648 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 PRAMEF6Q5VXH4 476 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 TEX36Q5VZQ5 186 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 C6orf120Q7Z4R8 191 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 LHFPL4Q7Z7J7 247 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 CTAGE3PQ8IX95 158 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 C11orf53Q8IXP5 236 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 FAM71E2Q8N5Q1 922 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 OR7A2PQ8NGA2 310 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 OR5D13Q8NGL4 314 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 OR8U1Q8NH10 309 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 CHPT1Q8WUD6 406 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 SLC38A4Q969I6 547 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 ST6GALNAC6Q969X2 333 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 NABP1Q96AH0 204 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 SLC25A44Q96H78 314 aaPredicted RBP3.41□□□□□ -1.86
BRCA1-217ENST00000487825 ATF6BQ99941 703 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 OR2H1Q9GZK4 316 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 SLC38A1Q9H2H9 487 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 OR51I1Q9H343 314 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 RETNQ9HD89 108 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 ABCB10Q9NRK6 738 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 SLC35D1Q9NTN3 355 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 OBSCNQ5VST9 7968 aa3.41□□□□□ -1.86
BRCA1-217ENST00000487825 IGKV1D-42A0A075B6H8 117 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 TRAV36DV7A0A075B6V5 113 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 hCG_1809904A0A1W2PP81 198 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 A0A1W2PPE2 198 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 A0A1W2PR64 198 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 A0A1W2PRV1 198 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 IQCF6A8MYZ5 107 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 ANGPT2O15123 496 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 ARPC2O15144 300 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 MAGEB3O15480 346 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 GLCEO94923 617 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 PTBP3O95758 552 aaKnown RBP3.4□□□□□ -1.87
BRCA1-217ENST00000487825 MBD3O95983 291 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 HLA-DPB1P04440 258 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 DBIP07108 87 aaKnown RBP3.4□□□□□ -1.87
BRCA1-217ENST00000487825 LAMP1P11279 417 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 PRG2P13727 222 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 ETS2P15036 469 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 RPL35AP18077 110 aaKnown RBP3.4□□□□□ -1.87
BRCA1-217ENST00000487825 SOAT1P35610 550 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 GGT2P36268 569 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 HPCAL1P37235 193 aa3.4□□□□□ -1.87
BRCA1-217ENST00000487825 OR3A4PP47883 348 aa3.4□□□□□ -1.87
Retrieved 100 of 20,778 RNA–protein pairs in 47.2 ms