RNA–Protein interactions for RNA: ENST00000487674.1

PRKCB-208, Transcript of protein kinase C beta, humanhuman

TSL 2

Gene PRKCB, Length 693 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRKCB-208ENST00000487674 CHST5Q9GZS9 411 aa6.87□□□□□ -1.31
PRKCB-208ENST00000487674 MRM2Q9UI43 246 aaKnown RBP6.87□□□□□ -1.31
PRKCB-208ENST00000487674 SLC7A11Q9UPY5 501 aa6.87□□□□□ -1.31
PRKCB-208ENST00000487674 LINC00312Q9Y6C7 94 aa6.87□□□□□ -1.31
PRKCB-208ENST00000487674 SESN1Q9Y6P5 492 aa6.87□□□□□ -1.31
PRKCB-208ENST00000487674 MINOS1-NBL1R4GNA1 71 aa6.87□□□□□ -1.31
PRKCB-208ENST00000487674 IGHV2-26A0A0B4J1V2 119 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 KRTAP4-8A0A0G2JLE6 195 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 FAM230AA0A1W2PPH8 454 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 TMEM82A0PJX8 343 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 MEX3AA1L020 520 aaKnown RBP6.86□□□□□ -1.31
PRKCB-208ENST00000487674 F8VVB4 439 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 F8VWA3 439 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 SYT7O43581 403 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 KRT8P05787 483 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 DAPP51397 102 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 EFNB1P98172 346 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 EDDM3AQ14507 147 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 DNAL1Q4LDG9 190 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 SLX4IPQ5VYV7 408 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 C12orf73Q69YU5 71 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 ZBTB49Q6ZSB9 765 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 BCDIN3DQ7Z5W3 292 aaKnown RBP6.86□□□□□ -1.31
PRKCB-208ENST00000487674 CATSPERDQ86XM0 798 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 Q8IYB0 196 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 ZNF676Q8N7Q3 588 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 TCEANCQ8N8B7 351 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 CCDC54Q8NEL0 328 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 SLAMF9Q96A28 289 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 SNX22Q96L94 193 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 OR5M11Q96RB7 305 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 CLEC7AQ9BXN2 247 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 SEBOXQ9HB31 216 aaPredicted RBP6.86□□□□□ -1.31
PRKCB-208ENST00000487674 KRT84Q9NSB2 600 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 AURKAIP1Q9NWT8 199 aaPredicted RBP6.86□□□□□ -1.31
PRKCB-208ENST00000487674 MTCH1Q9NZJ7 389 aa6.86□□□□□ -1.31
PRKCB-208ENST00000487674 H2AFY2Q9P0M6 372 aaPredicted RBP6.86□□□□□ -1.31
PRKCB-208ENST00000487674 IGKV1-27A0A075B6S5 117 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 ZAR1LA6NP61 321 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 FAM90A22PA8MWA6 464 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 H3BUI4 141 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 GYG2O15488 501 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 RPP14O95059 124 aaKnown RBP6.85□□□□□ -1.31
PRKCB-208ENST00000487674 HAND1O96004 215 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 PEX2P28328 305 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 FUT6P51993 359 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 BLCAPP62952 87 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 SLC34A1Q06495 639 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 IL18R1Q13478 541 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 UBE2V2Q15819 145 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 GRK1Q15835 563 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 ODF4Q2M2E3 257 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 TMEM95Q3KNT9 176 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 SPIN3Q5JUX0 258 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 SLC25A26Q70HW3 274 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 SSX6Q7RTT6 188 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 C16orf82Q7Z2V1 217 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 EGFL6Q8IUX8 553 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 ENTHD1Q8IYW4 607 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 YIPF7Q8N8F6 280 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 NDNFQ8TB73 568 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 PP6455Q8WZ26 134 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 EMG1Q92979 244 aaKnown RBP6.85□□□□□ -1.31
PRKCB-208ENST00000487674 UTP4Q969X6 686 aaKnown RBP6.85□□□□□ -1.31
PRKCB-208ENST00000487674 C10orf35Q96D05 121 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 BORCS8Q96FH0 119 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 AKR1E2Q96JD6 320 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 TMEM133Q9H2Q1 129 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 WARS2Q9UGM6 360 aaKnown RBP6.85□□□□□ -1.31
PRKCB-208ENST00000487674 ENOPH1Q9UHY7 261 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 POMPQ9Y244 141 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 HILPDAQ9Y5L2 63 aa6.85□□□□□ -1.31
PRKCB-208ENST00000487674 TRBV2A0A0J9YWF9 115 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 LOC107986453A0A1B0GWG9 222 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 A0A1W2PQL4 384 aaPredicted RBP6.84□□□□□ -1.31
PRKCB-208ENST00000487674 METTL15A6NJ78 407 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 MGST3O14880 152 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 PSPNO60542 156 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 MITFO75030 526 aaPredicted RBP6.84□□□□□ -1.31
PRKCB-208ENST00000487674 SULT1C4O75897 302 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 CYB5AP00167 134 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 SERPINA3P01011 423 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 OR2T7P0C7T2 308 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 UBCP0CG48 685 aaKnown RBP6.84□□□□□ -1.31
PRKCB-208ENST00000487674 PF4V1P10720 104 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 JUNBP17275 347 aaPredicted RBP6.84□□□□□ -1.31
PRKCB-208ENST00000487674 GABRR1P24046 479 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 HTR1DP28221 377 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 EPHA2P29317 976 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 HTR1FP30939 366 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 ARHGDIBP52566 201 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 P2RX3P56373 397 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 CD83Q01151 205 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 ZNF91Q05481 1191 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 FOXB2Q5VYV0 432 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 KDM4DQ6B0I6 523 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 Q6ZS46 218 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 FAM220AQ7Z4H9 259 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 TRAPPC6BQ86SZ2 158 aa6.84□□□□□ -1.31
PRKCB-208ENST00000487674 TPRX1Q8N7U7 411 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 43.6 ms