RNA–Protein interactions for RNA: ENST00000487284.2

CUX1-209, Transcript of cut like homeobox 1, humanhuman

TSL 2

Gene CUX1, Length 1,566 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Exosome, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CUX1-209ENST00000487284 HAGHLQ6PII5 290 aaPredicted RBP12.07□□□□□ -0.48
CUX1-209ENST00000487284 CLEC18BQ6UXF7 455 aa12.07□□□□□ -0.48
CUX1-209ENST00000487284 WDR86Q86TI4 376 aa12.07□□□□□ -0.48
CUX1-209ENST00000487284 PIAS4Q8N2W9 510 aaPredicted RBP12.07□□□□□ -0.48
CUX1-209ENST00000487284 CLEC18CQ8NCF0 446 aa12.07□□□□□ -0.48
CUX1-209ENST00000487284 OR8G5Q8NG78 346 aa12.07□□□□□ -0.48
CUX1-209ENST00000487284 SNAPC3Q92966 411 aa12.07□□□□□ -0.48
CUX1-209ENST00000487284 EMG1Q92979 244 aaKnown RBP12.07□□□□□ -0.48
CUX1-209ENST00000487284 FBXW5Q969U6 566 aa12.07□□□□□ -0.48
CUX1-209ENST00000487284 PLPPR2Q96GM1 343 aa12.07□□□□□ -0.48
CUX1-209ENST00000487284 RADILQ96JH8 1075 aa12.07□□□□□ -0.48
CUX1-209ENST00000487284 PLEKHJ1Q9NW61 149 aa12.07□□□□□ -0.48
CUX1-209ENST00000487284 SLC2A8Q9NY64 477 aa12.07□□□□□ -0.48
CUX1-209ENST00000487284 NKIRAS2Q9NYR9 191 aa12.07□□□□□ -0.48
CUX1-209ENST00000487284 MTCH1Q9NZJ7 389 aa12.07□□□□□ -0.48
CUX1-209ENST00000487284 FLVCR2Q9UPI3 526 aa12.07□□□□□ -0.48
CUX1-209ENST00000487284 HRNRQ86YZ3 2850 aaPredicted RBP12.07□□□□□ -0.48
CUX1-209ENST00000487284 GCN1Q92616 2671 aaKnown RBP12.07□□□□□ -0.48
CUX1-209ENST00000487284 A0A1B0GWJ7 208 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 PRSS44E7EML9 344 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 TRAPPC2LH3BP13 241 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 ARPC1BO15143 372 aaKnown RBP12.06□□□□□ -0.48
CUX1-209ENST00000487284 PRAF2O60831 178 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 PDCD6O75340 191 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 NKX6-1P78426 367 aaPredicted RBP12.06□□□□□ -0.48
CUX1-209ENST00000487284 ZMYND11Q15326 602 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 ACTBL2Q562R1 376 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 NKAPLQ5M9Q1 402 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 NCMAPQ5T1S8 102 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 OR52W1Q6IF63 320 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 OR10AD1Q8NGE0 317 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 OR6F1Q8NGZ6 308 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 GIMAP1Q8WWP7 306 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 GINS4Q9BRT9 223 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 ESRP2Q9H6T0 727 aaKnown RBP12.06□□□□□ -0.48
CUX1-209ENST00000487284 RHOFQ9HBH0 211 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 ZNF581Q9P0T4 197 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 PLEKHA6Q9Y2H5 1048 aa12.06□□□□□ -0.48
CUX1-209ENST00000487284 ABCA4P78363 2273 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 TMEM210A6NLX4 147 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 DEFB108AA8MXU0 73 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 DISC1C4P0D8 188 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 F8VVB4 439 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 F8VWA3 439 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 CCNKO75909 580 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 GCH1P30793 250 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 PMELP40967 661 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 RRAS2P62070 204 aaPredicted RBP12.05□□□□□ -0.48
CUX1-209ENST00000487284 OR8G1Q15617 311 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 ADAM5Q6NVV9 412 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 HOGA1Q86XE5 327 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 DMRTC2Q8IXT2 367 aaPredicted RBP12.05□□□□□ -0.48
CUX1-209ENST00000487284 BPIFB2Q8N4F0 458 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 SLC6A7Q99884 636 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 TMEM100Q9NV29 134 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 ETAA1Q9NY74 926 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 SPEF1Q9Y4P9 236 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 KLF2Q9Y5W3 355 aaPredicted RBP12.05□□□□□ -0.48
CUX1-209ENST00000487284 USP9YO00507 2555 aaPredicted RBP12.05□□□□□ -0.48
CUX1-209ENST00000487284 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP12.05□□□□□ -0.48
CUX1-209ENST00000487284 MLNRO43193 412 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 TPD52L2O43399 206 aaKnown RBP12.05□□□□□ -0.48
CUX1-209ENST00000487284 TIMM8AO60220 97 aaPredicted RBP12.05□□□□□ -0.48
CUX1-209ENST00000487284 HRH1P35367 487 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 GLRXP35754 106 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 FABP6P51161 128 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 MPV17LQ2QL34 196 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 BEX5Q5H9J7 111 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 VAX1Q5SQQ9 334 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 RGS7BPQ6MZT1 257 aaPredicted RBP12.05□□□□□ -0.48
CUX1-209ENST00000487284 SLC22A25Q6T423 547 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 OR4K15Q8NH41 348 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 ST6GAL2Q96JF0 529 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 PRRT1Q99946 306 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 SLC25A21Q9BQT8 299 aaPredicted RBP12.05□□□□□ -0.48
CUX1-209ENST00000487284 SULT4A1Q9BR01 284 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 FAAP24Q9BTP7 215 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 PLK3Q9H4B4 646 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 SCP2D1Q9UJQ7 156 aa12.05□□□□□ -0.48
CUX1-209ENST00000487284 H0YL77 283 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 IL5P05113 134 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 ZNF250P15622 560 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 FUT3P21217 361 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 LOXP28300 417 aaPredicted RBP12.04□□□□□ -0.48
CUX1-209ENST00000487284 ZNF154Q13106 437 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 MSMPQ1L6U9 139 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 MICBQ29980 383 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 MEX3BQ6ZN04 569 aaKnown RBP12.04□□□□□ -0.48
CUX1-209ENST00000487284 IDO2Q6ZQW0 420 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 Q6ZR03 302 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 LINC00596Q86U02 117 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 SCCPDHQ8NBX0 429 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 BEST4Q8NFU0 473 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 MED30Q96HR3 178 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 HS3ST6Q96QI5 342 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 OR51J1Q9H342 316 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 RCC2Q9P258 522 aaKnown RBP12.04□□□□□ -0.48
CUX1-209ENST00000487284 AK3Q9UIJ7 227 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 POU2F3Q9UKI9 436 aa12.04□□□□□ -0.48
CUX1-209ENST00000487284 POLDIP2Q9Y2S7 368 aa12.04□□□□□ -0.48
Retrieved 100 of 20,778 RNA–protein pairs in 50.8 ms