RNA–Protein interactions for RNA: ENST00000487252.1

TRIM56-204, Transcript of tripartite motif containing 56, humanhuman

TSL 3

Gene TRIM56, Length 735 nt, Biotype processed transcript.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TRIM56-204ENST00000487252 ZNF85Q03923 595 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 ZNF74Q16587 644 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 SLC25A47Q6Q0C1 308 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 C10orf99Q6UWK7 81 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 TMEM91Q6ZNR0 172 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 TMEM219Q86XT9 240 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 C10orf53Q8N6V4 93 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 LRRC75AQ8NAA5 344 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 OR4X2Q8NGF9 303 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 ASB10Q8WXI3 467 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 TMEM203Q969S6 136 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 RASD2Q96D21 266 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 ALG8Q9BVK2 526 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 NRIP3Q9NQ35 241 aa9.3□□□□□ -0.92
TRIM56-204ENST00000487252 ZNF256Q9Y2P7 627 aaPredicted RBP9.3□□□□□ -0.92
TRIM56-204ENST00000487252 SIRT4Q9Y6E7 314 aaPredicted RBP9.3□□□□□ -0.92
TRIM56-204ENST00000487252 GABRPO00591 440 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 IMPA2O14732 288 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 TXNDC12O95881 172 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 CD1AP06126 327 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 FRMD6-AS1P0C7T7 363 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 CELP19835 753 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 PTBP1P26599 531 aaKnown RBP eCLIP9.29□□□□□ -0.92
TRIM56-204ENST00000487252 TAS2R43P59537 309 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 FMODQ06828 376 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 TRAM1Q15629 374 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 SLC35D3Q5M8T2 416 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 COLCA1Q6ZS62 124 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 SYS1Q8N2H4 156 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 GCSAMQ8N6F7 178 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 ZFP41Q8N8Y5 198 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 PLPP7Q8NBV4 271 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 SETD6Q8TBK2 473 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 CHAC2Q8WUX2 184 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 AP3S1Q92572 193 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 CEP19Q96LK0 163 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 ERMAPQ96PL5 475 aaPredicted RBP9.29□□□□□ -0.92
TRIM56-204ENST00000487252 SOSTQ9BQB4 213 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 WACQ9BTA9 647 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 SRRQ9GZT4 340 aa9.29□□□□□ -0.92
TRIM56-204ENST00000487252 ISG20L2Q9H9L3 353 aaKnown RBP9.29□□□□□ -0.92
TRIM56-204ENST00000487252 HERC1Q15751 4861 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 FAM90A8PA6NJQ4 464 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 MCIDASD6RGH6 385 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 OGG1O15527 345 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 SC5DO75845 299 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 HNRNPCP07910 306 aaKnown RBP eCLIP9.28□□□□□ -0.92
TRIM56-204ENST00000487252 ASAH2BP0C7U1 165 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 CFL1P23528 166 aaKnown RBP9.28□□□□□ -0.92
TRIM56-204ENST00000487252 SLC6A1P30531 599 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 MTNR1BP49286 362 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 RAB13P51153 203 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 SLC25A1P53007 311 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 DEFA1P59665 94 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 DEFA3P59666 94 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 PPP3R1P63098 170 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 ZNF79Q15937 498 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 KLHL12Q53G59 568 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 ARSJQ5FYB0 599 aaPredicted RBP9.28□□□□□ -0.92
TRIM56-204ENST00000487252 LCN1P1Q5VSP4 162 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 DMKNQ6E0U4 476 aaPredicted RBP9.28□□□□□ -0.92
TRIM56-204ENST00000487252 OVCH2Q7RTZ1 564 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 EGFL6Q8IUX8 553 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 LAX1Q8IWV1 398 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 CADM3Q8N126 398 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 DYNAPQ8N1N2 210 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 BOLLQ8N9W6 283 aaKnown RBP9.28□□□□□ -0.92
TRIM56-204ENST00000487252 BHLHE23Q8NDY6 225 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 OR52H1Q8NGJ2 320 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 KCTD12Q96CX2 325 aaKnown RBP9.28□□□□□ -0.92
TRIM56-204ENST00000487252 OR51V1Q9H2C8 321 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 ABCB9Q9NP78 766 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 PITPNC1Q9UKF7 332 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 IER3IP1Q9Y5U9 82 aa9.28□□□□□ -0.92
TRIM56-204ENST00000487252 A0A1W2PQL4 384 aaPredicted RBP9.27□□□□□ -0.93
TRIM56-204ENST00000487252 SHISA3A0PJX4 238 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 E9PI62 339 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 OR2T7P0C7T2 308 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 SPNP16150 400 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 HIST1H1CP16403 213 aaKnown RBP9.27□□□□□ -0.93
TRIM56-204ENST00000487252 TGM4P49221 684 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 C9orf66Q5T8R8 295 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 DDI2Q5TDH0 399 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 GDPD3Q7L5L3 318 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 HDDC2Q7Z4H3 204 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 FAM216BQ8N7L0 139 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 GDPD1Q8N9F7 314 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 POC5Q8NA72 575 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 CYB561A3Q8NBI2 242 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 OR10H4Q8NGA5 316 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 OR5D13Q8NGL4 314 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 OR2T27Q8NH04 317 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 OR4K13Q8NH42 304 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 RPS4Y2Q8TD47 263 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 OTULINQ96BN8 352 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 CCL13Q99616 98 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 ATF6BQ99941 703 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 TMED9Q9BVK6 235 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 POLE4Q9NR33 117 aa9.27□□□□□ -0.93
TRIM56-204ENST00000487252 PTTG3PQ9NZH4 202 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 76.5 ms