RNA–Protein interactions for RNA: ENST00000487160.1

PRPF38A-203, Transcript of pre-mRNA processing factor 38A, humanhuman

TSL 2

Gene PRPF38A, Length 926 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRPF38A-203ENST00000487160 OR6Q1Q8NGQ2 317 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 OR8K3Q8NH51 312 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 DDI1Q8WTU0 396 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 NRBF2Q96F24 287 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 SMARCD1Q96GM5 515 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 RNF145Q96MT1 663 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 TIMM17AQ99595 171 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 NDFIP1Q9BT67 221 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 MED10Q9BTT4 135 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 PARVGQ9HBI0 331 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 SLC39A1Q9NY26 324 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 IL37Q9NZH6 218 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 SCML1Q9UN30 329 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 YARS2Q9Y2Z4 477 aaKnown RBP3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 HIVEP3Q5T1R4 2406 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 UNC13CQ8NB66 2214 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 ESPL1Q14674 2120 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 HIVEP1P15822 2718 aa3.05□□□□□ -1.92
PRPF38A-203ENST00000487160 TACC2O95359 2948 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 DCHS2Q6V1P9 2916 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 A0A1W2PRD5 423 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 SERPINE3A8MV23 424 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 GABRPO00591 440 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 NVLO15381 856 aaKnown RBP3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 HPRT1P00492 218 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 CTSLP07711 333 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 ZNF32P17041 273 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 USF1P22415 310 aaPredicted RBP3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 NUP62P37198 522 aaPredicted RBP3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 CD151P48509 253 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 CDKN2DP55273 166 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 ZNF121P58317 390 aaPredicted RBP3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 ESRRGP62508 458 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 TNNC1P63316 161 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 SYCNQ0VAF6 134 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 ART3Q13508 389 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 IRF4Q15306 451 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 RPEL1Q2QD12 228 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 ZNF829Q3KNS6 432 aaPredicted RBP3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 CHRFAM7AQ494W8 412 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 NTM-AS1Q6ZSK4 140 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 ARRDC1Q8N5I2 433 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 DRAXINQ8NBI3 349 aaPredicted RBP3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 OR11H7Q8NGC8 314 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 OR51F2Q8NH61 342 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 WFDC5Q8TCV5 224 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 C15orf40Q8WUR7 153 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 RPEQ96AT9 228 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 LRRC39Q96DD0 335 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 STARD4Q96DR4 205 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 ANKRD36BP1Q96IX9 119 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 FOPNLQ96NB1 174 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 CALN1Q9BXU9 219 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 STMN4Q9H169 189 aaPredicted RBP3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 PATZ1Q9HBE1 687 aaKnown RBP3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 HMG20AQ9NP66 347 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 CHRAC1Q9NRG0 131 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 AGPAT3Q9NRZ7 376 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 GGA2Q9UJY4 613 aa3.04□□□□□ -1.92
PRPF38A-203ENST00000487160 IGKV2D-24A0A075B6R9 120 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 LOC100653049A0A140TA62 436 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 A6NDN8 102 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 SYCE1LA8MT33 242 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 D6RAR5 112 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 PRAMEF26H0Y7S4 382 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 PLPP1O14494 284 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 CDC40O60508 579 aaKnown RBP eCLIP3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 KRT34O76011 436 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 MBP02144 154 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 TNNC2P02585 160 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 IGFBP3P17936 291 aaPredicted RBP3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 DTYMKP23919 212 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 CD70P32970 193 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 GPR1P46091 355 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 CCNG1P51959 295 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 MAP3K7CLP57077 242 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 PFN3P60673 137 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 EIF3IQ13347 325 aaKnown RBP3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 EBI3Q14213 229 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 KIR2DS1Q14954 304 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 GABRA6Q16445 453 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 DEFB133Q30KQ1 61 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 GCSAMLQ5JQS6 135 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 C9orf64Q5T6V5 341 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 CLEC20AQ6ZU45 233 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 LINC00336Q6ZUF6 198 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 HORMAD1Q86X24 394 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 VKORC1L1Q8N0U8 176 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 STK40Q8N2I9 435 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 SPERTQ8NA61 448 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 INO80EQ8NBZ0 244 aaPredicted RBP3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 COQ8AQ8NI60 647 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 CACNG8Q8WXS5 425 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 RGP1Q92546 391 aaPredicted RBP3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 KLK6Q92876 244 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 APH1AQ96BI3 265 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 C9orf72Q96LT7 481 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 CHID1Q9BWS9 393 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 WFDC1Q9HC57 220 aa3.03□□□□□ -1.92
PRPF38A-203ENST00000487160 CSNK1G1Q9HCP0 422 aa3.03□□□□□ -1.92
Retrieved 100 of 20,778 RNA–protein pairs in 160.9 ms