RNA–Protein interactions for RNA: ENST00000486810.5

COPS3-209, Transcript of COP9 signalosome subunit 3, humanhuman

TSL 3

Gene COPS3, Length 938 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COPS3-209ENST00000486810 HTR1FP30939 366 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 BTCP35070 178 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 SNCAP37840 140 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 AMTP48728 403 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 DNASE1L1P49184 302 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 SULT1A1P50225 295 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 METAP2P50579 478 aaKnown RBP eCLIP4.66□□□□□ -1.66
COPS3-209ENST00000486810 EFNA5P52803 228 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 PDX1P52945 283 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 DVL1P1P54792 670 aaPredicted RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 TCTAP57738 103 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 S100A10P60903 97 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 UFM1P61960 85 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 RPL7AP62424 266 aaKnown RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 H3F3AP84243 136 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 ADORA2A-AS1P86434 159 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 GNMTQ14749 295 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 MAD2L1BPQ15013 274 aaPredicted RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 IAH1Q2TAA2 248 aaPredicted RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 TTLL9Q3SXZ7 439 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 SLC25A52Q3SY17 297 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 LRRC10Q5BKY1 277 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 CT45A2Q5DJT8 189 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 C6orf136Q5SQH8 315 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 UTF1Q5T230 341 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 CD200R1LQ6Q8B3 271 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 TPRG1Q6ZUI0 275 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 OR8I2Q8N0Y5 310 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 LRRC75AQ8NAA5 344 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 RELL2Q8NC24 303 aaPredicted RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 OR5B3Q8NH48 314 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 ZNF418Q8TF45 676 aaPredicted RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 ST8SIA1Q92185 356 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 APOBEC3DQ96AK3 386 aaPredicted RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 ESAMQ96AP7 390 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 RAB39BQ96DA2 213 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 ACY3Q96HD9 319 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 CAPNS2Q96L46 248 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 ZNF582Q96NG8 517 aaPredicted RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 PEBP4Q96S96 227 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 IMMP2LQ96T52 175 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 RBM24Q9BX46 236 aaKnown RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 CDCA4Q9BXL8 241 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 TMEM126AQ9H061 195 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 NXF5Q9H1B4 397 aaKnown RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 TMEM231Q9H6L2 316 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 CALHM2Q9HA72 323 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 APOBEC3GQ9HC16 384 aaKnown RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 BEX4Q9NWD9 120 aaPredicted RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 FKBP11Q9NYL4 201 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 IL36RNQ9UBH0 155 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 PLAGL1Q9UM63 463 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 EXO1Q9UQ84 846 aaKnown RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 SIGLEC7Q9Y286 467 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 WIPI2Q9Y4P8 454 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 DOCK5Q9H7D0 1870 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 MYO18AQ92614 2054 aaKnown RBP4.66□□□□□ -1.66
COPS3-209ENST00000486810 ABCA3Q99758 1704 aa4.66□□□□□ -1.66
COPS3-209ENST00000486810 ALKQ9UM73 1620 aa4.65□□□□□ -1.66
COPS3-209ENST00000486810 IGHV4-28A0A0C4DH34 117 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 IGHV1-69-2A0A0G2JMI3 117 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 KANTRA0A1W2PQU2 76 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 PRSS37A4D1T9 235 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 PSMB11A5LHX3 300 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 GGT3PA6NGU5 568 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 SERINC4A6NH21 518 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 TEX22C9J3V5 150 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 H7BYZ3 331 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 ERI3O43414 337 aaKnown RBP4.65□□□□□ -1.67
COPS3-209ENST00000486810 BCL2L11O43521 198 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 HAND1O96004 215 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 NRASP01111 189 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 EDN1P05305 212 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 WNT2P09544 360 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 SFTA3P0C7M3 94 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 TRGC1P0CF51 173 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 SLC25A4P12235 298 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 SRD5A1P18405 259 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 TPSB2P20231 275 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 USF1P22415 310 aaPredicted RBP4.65□□□□□ -1.67
COPS3-209ENST00000486810 HIST1H1TP22492 207 aaPredicted RBP4.65□□□□□ -1.67
COPS3-209ENST00000486810 ATP6V0CP27449 155 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 HTR1EP28566 365 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 GABRA5P31644 462 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 RPL22P35268 128 aaKnown RBP4.65□□□□□ -1.67
COPS3-209ENST00000486810 OR3A4PP47883 348 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 PAX9P55771 341 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 UBE2KP61086 200 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 HSD52Q0P140 79 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 PPP1R8Q12972 351 aaKnown RBP4.65□□□□□ -1.67
COPS3-209ENST00000486810 DHRS2Q13268 280 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 TPSAB1Q15661 275 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 TRMT12Q53H54 448 aaKnown RBP4.65□□□□□ -1.67
COPS3-209ENST00000486810 TMEM78Q5T7P6 136 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 GFI1BQ5VTD9 330 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 ZNF57Q68EA5 555 aaPredicted RBP4.65□□□□□ -1.67
COPS3-209ENST00000486810 ZNF730Q6ZMV8 503 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 BEST3Q8N1M1 668 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 C5orf17Q8NAS9 161 aa4.65□□□□□ -1.67
COPS3-209ENST00000486810 NOXO1Q8NFA2 376 aa4.65□□□□□ -1.67
Retrieved 100 of 20,778 RNA–protein pairs in 40.5 ms