RNA–Protein interactions for RNA: ENST00000486665.5

HDAC6-229, Transcript of histone deacetylase 6, humanhuman

TSL 2

Gene HDAC6, Length 598 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-229ENST00000486665 PPIAL4FP0DN26 164 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 PRKACAP17612 351 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 AMY2BP19961 511 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 DUSP1P28562 367 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 PDLIM4P50479 330 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 FGF12P61328 243 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 CNPY1Q3B7I2 92 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 PIGYQ3MUY2 71 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 TEX36Q5VZQ5 186 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 DNM1P46Q6ZS02 220 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 C1orf87Q8N0U7 546 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 OSR2Q8N2R0 312 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 LGALS14Q8TCE9 139 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 SLIRPQ9GZT3 109 aaKnown RBP10.69□□□□□ -0.7
HDAC6-229ENST00000486665 CCDC59Q9P031 241 aaKnown RBP10.69□□□□□ -0.7
HDAC6-229ENST00000486665 ZNF581Q9P0T4 197 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 ABRACLQ9P1F3 81 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 FBLN5Q9UBX5 448 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 PPIAL4AQ9Y536 164 aa10.69□□□□□ -0.7
HDAC6-229ENST00000486665 A0A0A6YYD4 124 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 TNFRSF13BO14836 293 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-229ENST00000486665 ZNF780AO75290 641 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-229ENST00000486665 IGHV2-70P01814 119 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 GYPAP02724 150 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 CSTBP04080 98 aaKnown RBP10.68□□□□□ -0.7
HDAC6-229ENST00000486665 PSG2P11465 335 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 MGMTP16455 207 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 GIFP27352 417 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 CEBPDP49716 269 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-229ENST00000486665 BTG1P62324 171 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 KRTAP1-1Q07627 177 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 GPR176Q14439 515 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 OR2W3Q7Z3T1 314 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 LRRC28Q86X40 367 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-229ENST00000486665 FAM90A1Q86YD7 464 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 Q8IYB0 196 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 OR51T1Q8NGJ9 327 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 KCNG3Q8TAE7 436 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 C10orf105Q8TEF2 133 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 CYYR1Q96J86 154 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 GAL3ST1Q99999 423 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 SELENOIQ9C0D9 397 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 RHOFQ9HBH0 211 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 MYOZ1Q9NP98 299 aaPredicted RBP10.68□□□□□ -0.7
HDAC6-229ENST00000486665 NLKQ9UBE8 527 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 COMMD3Q9UBI1 195 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 DNAJB11Q9UBS4 358 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 METRNQ9UJH8 293 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 RAB22AQ9UL26 194 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 ST3GAL6Q9Y274 331 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 WIPI2Q9Y4P8 454 aa10.68□□□□□ -0.7
HDAC6-229ENST00000486665 CR1P17927 2039 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 TANC2Q9HCD6 1990 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 IGKV1D-17A0A075B6S4 117 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 IGHV4-30-2A0A087WSY4 118 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 RFPL4AA6NLU0 287 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 OR2AT4A6NND4 320 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 RFPL4AL1F8VTS6 287 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 GEMIN2O14893 280 aaKnown RBP10.67□□□□□ -0.7
HDAC6-229ENST00000486665 TMEM127O75204 238 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 KNG1P01042 644 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 GTF2F2P13984 249 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 MUC1P15941 1255 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-229ENST00000486665 PRDX2P32119 198 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 SOX6P35712 828 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 GPR6P46095 362 aaPredicted RBP10.67□□□□□ -0.7
HDAC6-229ENST00000486665 BMXP51813 675 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 RPS27AP62979 156 aaKnown RBP10.67□□□□□ -0.7
HDAC6-229ENST00000486665 ZNF146Q15072 292 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 CLEC12BQ2HXU8 276 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 SMIM21Q3B7S5 101 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 STUMQ69YW2 141 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 Q6P435 159 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 CLEC2AQ6UVW9 174 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 PRSS57Q6UWY2 283 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 LYPD2Q6UXB3 125 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 CD177Q8N6Q3 437 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 ANGPTL6Q8NI99 470 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 FAM168AQ92567 244 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 RAB1CQ92928 201 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 KCTD12Q96CX2 325 aaKnown RBP10.67□□□□□ -0.7
HDAC6-229ENST00000486665 TMEM246Q9BRR3 403 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 NXF2Q9GZY0 626 aaKnown RBP10.67□□□□□ -0.7
HDAC6-229ENST00000486665 CST11Q9H112 138 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 LPAR5Q9H1C0 372 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 PCDHB16Q9NRJ7 776 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 OR14J1Q9UGF5 321 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 ZNF222Q9UK12 451 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 SPATA2Q9UM82 520 aa10.67□□□□□ -0.7
HDAC6-229ENST00000486665 TRAV38-1A0A0B4J264 116 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 A0A1B0GW55 424 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 VWC2LB2RUY7 222 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 CTDSP2O14595 271 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 FSTL3O95633 263 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 DUX4L2P0CJ85 424 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 DUX4L3P0CJ86 424 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 DUX4L4P0CJ87 422 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 DUX4L5P0CJ88 424 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 DUX4L6P0CJ89 424 aa10.66□□□□□ -0.7
HDAC6-229ENST00000486665 DUX4L7P0CJ90 424 aa10.66□□□□□ -0.7
Retrieved 100 of 20,778 RNA–protein pairs in 46.9 ms