RNA–Protein interactions for RNA: ENST00000486618.1

HDAC3-209, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 711 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-209ENST00000486618 SLC25A3Q00325 362 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 FOXL1Q12952 345 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 CCNIQ14094 377 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 GK3PQ14409 553 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 FGD3Q5JSP0 725 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 DCST2Q5T1A1 773 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 SIGLEC15Q6ZMC9 328 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF621Q6ZSS3 439 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 MOB3CQ70IA8 216 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 AHSA2Q719I0 299 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 FAM220AQ7Z4H9 259 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 TMEM144Q7Z5S9 345 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 NET1Q7Z628 596 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-209ENST00000486618 SVOPLQ8N434 492 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 LRRC18Q8N456 261 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 OR56A1Q8NGH5 318 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 OR51F2Q8NH61 342 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 OR5AK3PQ8NH89 298 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 DCAKDQ8WVC6 231 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 TMEM203Q969S6 136 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 SFRP2Q96HF1 295 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 Q96MT0 163 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF570Q96NI8 536 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 KCNA7Q96RP8 456 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 SSBP3Q9BWW4 388 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-209ENST00000486618 SUCNR1Q9BXA5 334 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 LAT2Q9GZY6 243 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 CACYBPQ9HB71 228 aaKnown RBP5.75□□□□□ -1.49
HDAC3-209ENST00000486618 DYNLRB1Q9NP97 96 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 SLC7A10Q9NS82 523 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 ACER3Q9NUN7 267 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 TMEM45AQ9NWC5 275 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 ELF5Q9UKW6 265 aaPredicted RBP5.75□□□□□ -1.49
HDAC3-209ENST00000486618 TRAPPC4Q9Y296 219 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 KCNIP3Q9Y2W7 256 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 FAM96BQ9Y3D0 163 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 FIS1Q9Y3D6 152 aa5.75□□□□□ -1.49
HDAC3-209ENST00000486618 RBM14-RBM4A0A0A0MSL8 147 aaKnown RBP5.74□□□□□ -1.49
HDAC3-209ENST00000486618 IGHV1-18A0A0C4DH31 117 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 A0A1B0GVI7 797 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 PRSS37A4D1T9 235 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 NPIPB9F8W1W9 429 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 M0R3G1 203 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 IMPA2O14732 288 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 DLEU1O43261 78 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 AIREO43918 545 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 PLIN3O60664 434 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 PRAF2O60831 178 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 DCTN3O75935 186 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 KRT33AO76009 404 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 FARS2O95363 451 aaKnown RBP5.74□□□□□ -1.49
HDAC3-209ENST00000486618 FAM107AO95990 144 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 CD5P06127 495 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 HLA-GP17693 338 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 PRPH2P23942 346 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 RBM34P42696 430 aaKnown RBP5.74□□□□□ -1.49
HDAC3-209ENST00000486618 GPR6P46095 362 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-209ENST00000486618 CCR6P51684 374 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 RAB2AP61019 212 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 SLC35A1P78382 337 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 SKP2Q13309 424 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 FOXE3Q13461 319 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 MIDNQ504T8 468 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 SAMD4BQ5PRF9 694 aaKnown RBP5.74□□□□□ -1.49
HDAC3-209ENST00000486618 TSPO2Q5TGU0 170 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 REP15Q6BDI9 236 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF770Q6IQ21 691 aaPredicted RBP5.74□□□□□ -1.49
HDAC3-209ENST00000486618 ANKRD16Q6P6B7 361 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 DPY19L2P2Q6ZN68 376 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF836Q6ZNA1 936 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 PRSS45Q7RTY3 260 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 COMMD2Q86X83 199 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 LGI3Q8N145 548 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 CLDN22Q8N7P3 220 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 NUP37Q8NFH4 326 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 OR52H1Q8NGJ2 320 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 OR2T11Q8NH01 316 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF563Q8TA94 476 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 CASTOR1Q8WTX7 329 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 MRPL24Q96A35 216 aaKnown RBP5.74□□□□□ -1.49
HDAC3-209ENST00000486618 TESCQ96BS2 214 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF524Q96C55 264 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 DOK1Q99704 481 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 ECSITQ9BQ95 431 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 KRTAP3-1Q9BYR8 98 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 TLNRD1Q9H1K6 362 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 CDC42EP4Q9H3Q1 356 aaKnown RBP5.74□□□□□ -1.49
HDAC3-209ENST00000486618 TMEM38AQ9H6F2 299 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF442Q9H7R0 627 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 ACOXLQ9NUZ1 547 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 TMEM216Q9P0N5 145 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 TMEM181Q9P2C4 612 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 ZNF346Q9UL40 294 aaKnown RBP5.74□□□□□ -1.49
HDAC3-209ENST00000486618 COPS3Q9UNS2 423 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 FLVCR1Q9Y5Y0 555 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 NOTCH1P46531 2555 aa5.74□□□□□ -1.49
HDAC3-209ENST00000486618 C9orf170A2RU37 121 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 TRDCB7Z8K6 153 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 MS4A18H0YCH9 400 aa5.73□□□□□ -1.49
HDAC3-209ENST00000486618 H3BNX3 289 aa5.73□□□□□ -1.49
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms