RNA–Protein interactions for RNA: ENST00000486028.1

HMG20B-211, Transcript of high mobility group 20B, humanhuman

TSL 2

Gene HMG20B, Length 719 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMG20B-211ENST00000486028 ARF6P62330 175 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 PPP3R1P63098 170 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 SLC35A2P78381 396 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 BDH1Q02338 343 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 KISS1Q15726 138 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 KLF17Q5JT82 389 aaPredicted RBP10.29□□□□□ -0.76
HMG20B-211ENST00000486028 METTL11BQ5VVY1 283 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 GPR107Q5VW38 600 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 SAXO1Q8IYX7 474 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 CMTM4Q8IZR5 234 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 BPIFB2Q8N4F0 458 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 ZSCAN4Q8NAM6 433 aaPredicted RBP10.29□□□□□ -0.76
HMG20B-211ENST00000486028 LY6G5BQ8NDX9 201 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 ZNF418Q8TF45 676 aaPredicted RBP10.29□□□□□ -0.76
HMG20B-211ENST00000486028 EMG1Q92979 244 aaKnown RBP10.29□□□□□ -0.76
HMG20B-211ENST00000486028 TMEM106AQ96A25 262 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 RFT1Q96AA3 541 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 WDFY2Q96P53 400 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 SPACA5Q96QH8 159 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 PCGF1Q9BSM1 259 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 DCTN5Q9BTE1 182 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 DUSP21Q9H596 190 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 PAK1IP1Q9NWT1 392 aaPredicted RBP10.29□□□□□ -0.76
HMG20B-211ENST00000486028 TAS2R4Q9NYW5 299 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 MAB21L2Q9Y586 359 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 COL6A5A8TX70 2615 aa10.29□□□□□ -0.76
HMG20B-211ENST00000486028 TRBV5-5A0A0J9YX44 114 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 PNMA8CA0A1B0GUJ8 204 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 F8VVB4 439 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 F8VWA3 439 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 SPRY1O43609 319 aaPredicted RBP10.28□□□□□ -0.76
HMG20B-211ENST00000486028 RGS10O43665 173 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 ALDOBP05062 364 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 CHRM2P08172 466 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 CELP19835 753 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 BCL3P20749 454 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 CRHBPP24387 322 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 NPBWR2P48146 333 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 SPHARQ15513 63 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 Q499Y3 187 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 RBM48Q5RL73 367 aaKnown RBP10.28□□□□□ -0.76
HMG20B-211ENST00000486028 ZNF529Q6P280 563 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 FAM58AQ8N1B3 248 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 OR5D18Q8NGL1 313 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 OR13F1Q8NGS4 319 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 C8orf46Q8TAG6 207 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 PGLYRP3Q96LB9 341 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 SUCNR1Q9BXA5 334 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 MS4A7Q9GZW8 240 aaPredicted RBP10.28□□□□□ -0.76
HMG20B-211ENST00000486028 FAM234AQ9H0X4 552 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 SEBOXQ9HB31 216 aaPredicted RBP10.28□□□□□ -0.76
HMG20B-211ENST00000486028 RHOFQ9HBH0 211 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 TMEM138Q9NPI0 162 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 ONECUT1Q9UBC0 465 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 CKLFQ9UBR5 152 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 GLS2Q9UI32 602 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 KPTNQ9Y664 436 aa10.28□□□□□ -0.76
HMG20B-211ENST00000486028 TRBV23-1A0A0A0MS06 115 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 A0A1W2PQ09 198 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 ANGPTL7O43827 346 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 KDM4BO94953 1096 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 SFTPBP07988 381 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 PRKACAP17612 351 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 CEBPDP49716 269 aaPredicted RBP10.27□□□□□ -0.77
HMG20B-211ENST00000486028 BPIFB3P59826 476 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 RPS11P62280 158 aaKnown RBP eCLIP10.27□□□□□ -0.77
HMG20B-211ENST00000486028 RELBQ01201 579 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 COL10A1Q03692 680 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 ACSM1Q08AH1 577 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 CBX3Q13185 183 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 IRF3Q14653 427 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 PDCD1Q15116 288 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 GPR157Q5UAW9 335 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 USP43Q70EL4 1123 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 KIR3DL3Q8N743 410 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 OR13C5Q8NGS8 318 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 CHPT1Q8WUD6 406 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 TMEM158Q8WZ71 300 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 SGCDQ92629 289 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 THRSPQ92748 146 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 GPER1Q99527 375 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 CCDC90BQ9GZT6 254 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 SIRPDQ9H106 197 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 HMG20AQ9NP66 347 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 RBFOX1Q9NWB1 397 aaKnown RBP10.27□□□□□ -0.77
HMG20B-211ENST00000486028 ZNF69Q9UC07 566 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 BLOC1S6Q9UL45 172 aa10.27□□□□□ -0.77
HMG20B-211ENST00000486028 FBN1P35555 2871 aaKnown RBP10.27□□□□□ -0.77
HMG20B-211ENST00000486028 IGHV3OR16-10A0A075B7F0 116 aa10.26□□□□□ -0.77
HMG20B-211ENST00000486028 TRBV5-7A0A0A0MS05 114 aa10.26□□□□□ -0.77
HMG20B-211ENST00000486028 TRAV40A0A0B4J280 105 aa10.26□□□□□ -0.77
HMG20B-211ENST00000486028 IGKV1-12A0A0C4DH73 117 aa10.26□□□□□ -0.77
HMG20B-211ENST00000486028 K7N7A8 449 aa10.26□□□□□ -0.77
HMG20B-211ENST00000486028 SH2D1BO14796 132 aa10.26□□□□□ -0.77
HMG20B-211ENST00000486028 GPX5O75715 221 aa10.26□□□□□ -0.77
HMG20B-211ENST00000486028 HAND1O96004 215 aa10.26□□□□□ -0.77
HMG20B-211ENST00000486028 IGKV1D-12P01611 117 aa10.26□□□□□ -0.77
HMG20B-211ENST00000486028 TK1P04183 234 aa10.26□□□□□ -0.77
HMG20B-211ENST00000486028 IGHV4-38-2P0DP08 117 aa10.26□□□□□ -0.77
HMG20B-211ENST00000486028 MMP9P14780 707 aa10.26□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 27 ms