RNA–Protein interactions for RNA: ENST00000484855.2

CTSA-207, Transcript of cathepsin A, humanhuman

TSL 1 (best)

Gene CTSA, Length 2,183 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTSA-207ENST00000484855 FAM27E3Q08E93 113 aa14.25□□□□□ -0.13
CTSA-207ENST00000484855 MPV17LQ2QL34 196 aa14.25□□□□□ -0.13
CTSA-207ENST00000484855 C3orf36Q3SXR2 165 aa14.25□□□□□ -0.13
CTSA-207ENST00000484855 WDR86Q86TI4 376 aa14.25□□□□□ -0.13
CTSA-207ENST00000484855 TMEM17Q86X19 198 aa14.25□□□□□ -0.13
CTSA-207ENST00000484855 MUC20Q8N307 709 aaPredicted RBP14.25□□□□□ -0.13
CTSA-207ENST00000484855 OR8G5Q8NG78 346 aa14.25□□□□□ -0.13
CTSA-207ENST00000484855 PPA2Q9H2U2 334 aa14.25□□□□□ -0.13
CTSA-207ENST00000484855 PLK3Q9H4B4 646 aa14.25□□□□□ -0.13
CTSA-207ENST00000484855 TMEM100Q9NV29 134 aa14.25□□□□□ -0.13
CTSA-207ENST00000484855 IL36RNQ9UBH0 155 aa14.25□□□□□ -0.13
CTSA-207ENST00000484855 FZR1Q9UM11 496 aa14.25□□□□□ -0.13
CTSA-207ENST00000484855 IGKV1D-8A0A087WSZ0 117 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 FABP7O15540 132 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 RHBDL1O75783 438 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 KITLGP21583 273 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 ID4P47928 161 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 GZMKP49863 264 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 FAM76BQ5HYJ3 339 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 MBNL2Q5VZF2 373 aaKnown RBP14.24□□□□□ -0.13
CTSA-207ENST00000484855 SEZ6L2Q6UXD5 910 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 SPICQ8N5J4 248 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 ZBTB8BQ8NAP8 495 aaPredicted RBP14.24□□□□□ -0.13
CTSA-207ENST00000484855 TERB2Q8NHR7 220 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 ZNF431Q8TF32 576 aaPredicted RBP14.24□□□□□ -0.13
CTSA-207ENST00000484855 ZNF436Q9C0F3 470 aaPredicted RBP14.24□□□□□ -0.13
CTSA-207ENST00000484855 H0YL77 283 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 SDCBPO00560 298 aaPredicted RBP14.24□□□□□ -0.13
CTSA-207ENST00000484855 ERP29P30040 261 aaKnown RBP14.24□□□□□ -0.13
CTSA-207ENST00000484855 PMELP40967 661 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 FABP6P51161 128 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 IKZF1Q13422 519 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 CDK10Q15131 360 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 LINC00596Q86U02 117 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 SCCPDHQ8NBX0 429 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 TRAF4Q9BUZ4 470 aaPredicted RBP14.24□□□□□ -0.13
CTSA-207ENST00000484855 C12orf4Q9NQ89 552 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 POLDIP2Q9Y2S7 368 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 NPTNQ9Y639 398 aa14.24□□□□□ -0.13
CTSA-207ENST00000484855 TLN1Q9Y490 2541 aaKnown RBP14.24□□□□□ -0.13
CTSA-207ENST00000484855 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP14.23□□□□□ -0.13
CTSA-207ENST00000484855 FAM221AA4D161 298 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 TMEM210A6NLX4 147 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 UBE2MP61081 183 aaKnown RBP14.23□□□□□ -0.13
CTSA-207ENST00000484855 RGS7BPQ6MZT1 257 aaPredicted RBP14.23□□□□□ -0.13
CTSA-207ENST00000484855 OVCH2Q7RTZ1 564 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 LIX1LQ8IVB5 337 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 FAM58AQ8N1B3 248 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 OR13G1Q8NGZ3 307 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 MARCH1Q8TCQ1 289 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 FN3KRPQ9HA64 309 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 ANXA10Q9UJ72 324 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 MLNRO43193 412 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 CRYAAP02489 173 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 KLRB1Q12918 225 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 ZNF154Q13106 437 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 SLC25A42Q86VD7 318 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 RHOFQ9HBH0 211 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 DLL4Q9NR61 685 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 CA10Q9NS85 328 aa14.23□□□□□ -0.13
CTSA-207ENST00000484855 RCC2Q9P258 522 aaKnown RBP14.23□□□□□ -0.13
CTSA-207ENST00000484855 TPD52L2O43399 206 aaKnown RBP14.22□□□□□ -0.13
CTSA-207ENST00000484855 DUSP1P28562 367 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 CCKARP32238 428 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 NPY4RP50391 375 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 DHRS2Q13268 280 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 IL13RA2Q14627 380 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 C1QTNF12Q5T7M4 302 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 LHFPL1Q86WI0 220 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 UXS1Q8NBZ7 420 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 RELL2Q8NC24 303 aaPredicted RBP14.22□□□□□ -0.13
CTSA-207ENST00000484855 ELOVL5Q9NYP7 299 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 H3BUI4 141 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 HLA-AP01891 365 aaKnown RBP14.22□□□□□ -0.13
CTSA-207ENST00000484855 GRPP07492 148 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 FPR2P25090 351 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 TMEM211Q6ICI0 200 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 NLRC3Q7RTR2 1065 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 Q8IYB0 196 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 OR2AK2Q8NG84 335 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 ZNF286AQ9HBT8 521 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 CHMP1AQ9HD42 196 aaPredicted RBP14.22□□□□□ -0.13
CTSA-207ENST00000484855 OSGIN2Q9Y236 505 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 SPEF1Q9Y4P9 236 aa14.22□□□□□ -0.13
CTSA-207ENST00000484855 IGHV3-64DA0A0J9YX35 117 aa14.21□□□□□ -0.13
CTSA-207ENST00000484855 CDIPTO14735 213 aa14.21□□□□□ -0.13
CTSA-207ENST00000484855 GRK1Q15835 563 aa14.21□□□□□ -0.13
CTSA-207ENST00000484855 ZCCHC14Q8WYQ9 949 aaKnown RBP14.21□□□□□ -0.13
CTSA-207ENST00000484855 HYLS1Q96M11 299 aa14.21□□□□□ -0.13
CTSA-207ENST00000484855 CHIAQ9BZP6 476 aa14.21□□□□□ -0.13
CTSA-207ENST00000484855 CXXC4Q9H2H0 198 aa14.21□□□□□ -0.13
CTSA-207ENST00000484855 RANBP3Q9H6Z4 567 aaPredicted RBP14.21□□□□□ -0.13
CTSA-207ENST00000484855 SPACA1Q9HBV2 294 aa14.21□□□□□ -0.13
CTSA-207ENST00000484855 CEACAM18A8MTB9 384 aa14.2□□□□□ -0.14
CTSA-207ENST00000484855 MCRIP1C9JLW8 97 aa14.2□□□□□ -0.14
CTSA-207ENST00000484855 C16orf97H3BN30 126 aa14.2□□□□□ -0.14
CTSA-207ENST00000484855 TAS2R31P59538 309 aa14.2□□□□□ -0.14
CTSA-207ENST00000484855 PPP1R1AQ13522 171 aa14.2□□□□□ -0.14
CTSA-207ENST00000484855 AADACL3Q5VUY0 350 aa14.2□□□□□ -0.14
CTSA-207ENST00000484855 FAHD2BQ6P2I3 314 aaPredicted RBP14.2□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 40.7 ms