RNA–Protein interactions for RNA: ENST00000483723.5

CLK3-204, Transcript of CDC like kinase 3, humanhuman

TSL 2

Gene CLK3, Length 1,749 nt, Biotype nonsense mediated decay, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CLK3-204ENST00000483723 IFT22Q9H7X7 185 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 BEX1Q9HBH7 125 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 RANGRFQ9HD47 186 aaPredicted RBP11.94□□□□□ -0.5
CLK3-204ENST00000483723 PRRC2CQ9Y520 2896 aaKnown RBP11.94□□□□□ -0.5
CLK3-204ENST00000483723 TRGV8A0A0C4DH27 118 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.94□□□□□ -0.5
CLK3-204ENST00000483723 TIMM8AO60220 97 aaPredicted RBP11.94□□□□□ -0.5
CLK3-204ENST00000483723 GLAP06280 429 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 SULT1A3P0DMM9 295 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 SULT1A4P0DMN0 295 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 AMY2BP19961 511 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 CD40P25942 277 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 CASP6P55212 293 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 TAS2R46P59540 309 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 ZNF154Q13106 437 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 CBX3Q13185 183 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 ZNF626Q68DY1 528 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 C11orf53Q8IXP5 236 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 FAM58AQ8N1B3 248 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 ZDHHC22Q8N966 263 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 OR5AP2Q8NGF4 316 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 OR13G1Q8NGZ3 307 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 HDHD3Q9BSH5 251 aaPredicted RBP11.94□□□□□ -0.5
CLK3-204ENST00000483723 GPN1Q9HCN4 374 aaPredicted RBP11.94□□□□□ -0.5
CLK3-204ENST00000483723 ZNF230Q9UIE0 474 aaPredicted RBP11.94□□□□□ -0.5
CLK3-204ENST00000483723 POLDIP2Q9Y2S7 368 aa11.94□□□□□ -0.5
CLK3-204ENST00000483723 IGLV3-9A0A075B6K5 115 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 IGKV1D-8A0A087WSZ0 117 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 A8MV72 311 aaPredicted RBP11.93□□□□□ -0.5
CLK3-204ENST00000483723 OR7C1O76099 320 aaPredicted RBP11.93□□□□□ -0.5
CLK3-204ENST00000483723 IFNA6P05013 189 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 THBDP07204 575 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 PGA5P0DJD9 388 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 PDCD1Q15116 288 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 GRK1Q15835 563 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 ATPAF1Q5TC12 328 aaPredicted RBP11.93□□□□□ -0.5
CLK3-204ENST00000483723 OVCH2Q7RTZ1 564 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 LHFPL1Q86WI0 220 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 Q8IYB0 196 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 OR11H7Q8NGC8 314 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 OR5H2Q8NGV7 314 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 TERB2Q8NHR7 220 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 TMEM171Q8WVE6 324 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 ZNF488Q96MN9 340 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 FYTTD1Q96QD9 318 aaKnown RBP11.93□□□□□ -0.5
CLK3-204ENST00000483723 NRIP2Q9BQI9 281 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 SEC22CQ9BRL7 303 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 IL36RNQ9UBH0 155 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 IGF2RP11717 2491 aa11.93□□□□□ -0.5
CLK3-204ENST00000483723 TMEM82A0PJX8 343 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 PTBP3O95758 552 aaKnown RBP11.92□□□□□ -0.5
CLK3-204ENST00000483723 CSN2P05814 226 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 FCGR3AP08637 254 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 PPP3CBP16298 524 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 PRKACAP17612 351 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 CD83Q01151 205 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 MAB21L1Q13394 359 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 SRSF7Q16629 238 aaKnown RBP eCLIP11.92□□□□□ -0.5
CLK3-204ENST00000483723 SCGB2B2Q4G0G5 96 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 BRICD5Q6PL45 260 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 BATF2Q8N1L9 274 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 GTF3AQ92664 365 aaKnown RBP11.92□□□□□ -0.5
CLK3-204ENST00000483723 TRAF4Q9BUZ4 470 aaPredicted RBP11.92□□□□□ -0.5
CLK3-204ENST00000483723 SPACA1Q9HBV2 294 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 ING3Q9NXR8 418 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 FZR1Q9UM11 496 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 VSIG4Q9Y279 399 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 BSNQ9UPA5 3926 aa11.92□□□□□ -0.5
CLK3-204ENST00000483723 UBE2QL1A1L167 161 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 OR2AT4A6NND4 320 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 CDIPTO14735 213 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 RLN1P04808 185 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 PTAFRP25105 342 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 FBXL19-AS1Q494R0 122 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 Q6P435 159 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 Q6ZS49 121 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 LRP11Q86VZ4 500 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 SPICQ8N5J4 248 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 NUP37Q8NFH4 326 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 HES4Q9HCC6 221 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 ANXA10Q9UJ72 324 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 OSGIN2Q9Y236 505 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 NPTNQ9Y639 398 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 ATMQ13315 3056 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 LAMA5O15230 3695 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 DPRXA6NFQ7 191 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 ATP6V1G2-DDX39BF2Z307 99 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 CREBL2O60519 120 aaPredicted RBP11.91□□□□□ -0.5
CLK3-204ENST00000483723 NAPSAO96009 420 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 OR3A3P47888 321 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 RPS23P62266 143 aaKnown RBP11.91□□□□□ -0.5
CLK3-204ENST00000483723 MRPS15P82914 257 aaKnown RBP11.91□□□□□ -0.5
CLK3-204ENST00000483723 MZT1Q08AG7 82 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 ZNF146Q15072 292 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 CDK10Q15131 360 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 ALKBH2Q6NS38 261 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 PCSK4Q6UW60 755 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 TMEM108Q6UXF1 575 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 Q6ZPA2 131 aa11.91□□□□□ -0.5
CLK3-204ENST00000483723 SLC25A42Q86VD7 318 aa11.91□□□□□ -0.5
Retrieved 100 of 20,778 RNA–protein pairs in 46.4 ms