RNA–Protein interactions for RNA: ENST00000479485.5

SSR1-207, Transcript of signal sequence receptor subunit 1, humanhuman

TSL 2

Gene SSR1, Length 640 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSR1-207ENST00000479485 HERV-K104P61576 105 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 RPS23P62266 143 aaKnown RBP3.88□□□□□ -1.79
SSR1-207ENST00000479485 SNRPD1P62314 119 aaKnown RBP3.88□□□□□ -1.79
SSR1-207ENST00000479485 HIST1H2BCP62807 126 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 HIST1H3AP68431 136 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 RPL19P84098 196 aaKnown RBP3.88□□□□□ -1.79
SSR1-207ENST00000479485 PAX5Q02548 391 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 ZNF763Q0D2J5 394 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 SLC10A7Q0GE19 358 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 ST3GAL3Q11203 375 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 PRDX4Q13162 271 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 DHRS2Q13268 280 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 HERPUD1Q15011 391 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 RAB35Q15286 201 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 TAF9Q16594 264 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 HIST2H2BEQ16778 126 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 TMEM183BQ1AE95 376 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 ACOT6Q3I5F7 207 aaPredicted RBP3.88□□□□□ -1.79
SSR1-207ENST00000479485 CTSL3PQ5NE16 218 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 HIST2H2BFQ5QNW6 126 aaPredicted RBP3.88□□□□□ -1.79
SSR1-207ENST00000479485 ETFRF1Q6IPR1 90 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 PWWP2BQ6NUJ5 590 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 STEAP1BQ6NZ63 245 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 NIPAL3Q6P499 406 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 PODNL1Q6PEZ8 512 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 Q6ZRG5 221 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 CLEC20AQ6ZU45 233 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 SLC25A26Q70HW3 274 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 ERN2Q76MJ5 926 aaKnown RBP3.88□□□□□ -1.79
SSR1-207ENST00000479485 SLC35E3Q7Z769 313 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 PRSS58Q8IYP2 241 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 CLECL1Q8IZS7 167 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 KIR2DL5AQ8N109 375 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 TMEM86AQ8N2M4 240 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 C10orf53Q8N6V4 93 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 ADAD2Q8NCV1 583 aaKnown RBP3.88□□□□□ -1.79
SSR1-207ENST00000479485 OR10H4Q8NGA5 316 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 OR52B4Q8NGK2 314 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 OR5L2Q8NGL0 311 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 OR13C4Q8NGS5 318 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 OR13C2Q8NGS9 318 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 NUBPLQ8TB37 319 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 MITD1Q8WV92 249 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 APOBEC4Q8WW27 367 aaKnown RBP3.88□□□□□ -1.79
SSR1-207ENST00000479485 HIST1H2BHQ93079 126 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 MAL2Q969L2 176 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 TMEM106AQ96A25 262 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 TMEM159Q96B96 161 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 ANKRD9Q96BM1 317 aaPredicted RBP3.88□□□□□ -1.79
SSR1-207ENST00000479485 BPIFA2Q96DR5 249 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 MS4A6EQ96DS6 147 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 C16orf58Q96GQ5 468 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 SPATA33Q96N06 139 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 YPEL4Q96NS1 127 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 TGM7Q96PF1 710 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 CNN2Q99439 309 aaKnown RBP3.88□□□□□ -1.79
SSR1-207ENST00000479485 HIST1H2BNQ99877 126 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 HIST1H2BMQ99879 126 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 HIST1H2BLQ99880 126 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 MIEN1Q9BRT3 115 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 ZNF649Q9BS31 505 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 NIPSNAP3BQ9BS92 247 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 ATG101Q9BSB4 218 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 ULBP1Q9BZM6 244 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 EIF5A2Q9GZV4 153 aaKnown RBP3.88□□□□□ -1.79
SSR1-207ENST00000479485 TMEM231Q9H6L2 316 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 LPAR2Q9HBW0 351 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 KLHL28Q9NXS3 571 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 SLC2A8Q9NY64 477 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 AHSPQ9NZD4 102 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 SPG21Q9NZD8 308 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 ERRFI1Q9UJM3 462 aaPredicted RBP3.88□□□□□ -1.79
SSR1-207ENST00000479485 RPH3ALQ9UNE2 315 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 CSAG2Q9Y5P2 127 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 ARL5AQ9Y689 179 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 ZNF236Q9UL36 1845 aa3.88□□□□□ -1.79
SSR1-207ENST00000479485 TRIP11Q15643 1979 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 ANKRD12Q6UB98 2062 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 COL11A1P12107 1806 aaPredicted RBP3.87□□□□□ -1.79
SSR1-207ENST00000479485 PARP14Q460N5 1801 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 KCNE1BA0A087WTH5 132 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 A0A087X002 238 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 A0A0A6YYC8 382 aaPredicted RBP3.87□□□□□ -1.79
SSR1-207ENST00000479485 C5orf51A6NDU8 294 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 TLCD2A6NGC4 264 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 CASTOR2A6NHX0 329 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 A6NIN4 97 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 FAM183AA6NL82 134 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 RIIAD1A6NNX1 92 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 I3L1I5 382 aaPredicted RBP3.87□□□□□ -1.79
SSR1-207ENST00000479485 FFAR1O14842 300 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 CYB5BO43169 146 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 ZNF354AO60765 605 aaPredicted RBP3.87□□□□□ -1.79
SSR1-207ENST00000479485 TBX19O60806 448 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 SYNGR4O95473 234 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 DUS4LO95620 317 aaKnown RBP3.87□□□□□ -1.79
SSR1-207ENST00000479485 IGLV1-44P01699 117 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 RPN2P04844 631 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 BCHEP06276 602 aa3.87□□□□□ -1.79
SSR1-207ENST00000479485 SOD3P08294 240 aa3.87□□□□□ -1.79
Retrieved 100 of 20,778 RNA–protein pairs in 43.2 ms