RNA–Protein interactions for RNA: ENST00000479177.1

USP48-208, Transcript of ubiquitin specific peptidase 48, humanhuman

TSL 3

Gene USP48, Length 686 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
USP48-208ENST00000479177 SOSTQ9BQB4 213 aa5.62□□□□□ -1.51
USP48-208ENST00000479177 WDR12Q9GZL7 423 aaKnown RBP5.62□□□□□ -1.51
USP48-208ENST00000479177 CST11Q9H112 138 aa5.62□□□□□ -1.51
USP48-208ENST00000479177 METTL9Q9H1A3 318 aa5.62□□□□□ -1.51
USP48-208ENST00000479177 HMG20AQ9NP66 347 aa5.62□□□□□ -1.51
USP48-208ENST00000479177 C14orf119Q9NWQ9 140 aa5.62□□□□□ -1.51
USP48-208ENST00000479177 EXTL2Q9UBQ6 330 aa5.62□□□□□ -1.51
USP48-208ENST00000479177 ANKRD17O75179 2603 aaKnown RBP5.62□□□□□ -1.51
USP48-208ENST00000479177 CRYBG3Q68DQ2 2970 aa5.62□□□□□ -1.51
USP48-208ENST00000479177 TANC2Q9HCD6 1990 aa5.62□□□□□ -1.51
USP48-208ENST00000479177 A0A0A6YYD4 124 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 IGHV3-64DA0A0J9YX35 117 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 VSTM5A8MXK1 200 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 FAM25AB3EWG3 89 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 FAM25CB3EWG5 89 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 FAM25GB3EWG6 89 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 B9A039 149 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 J3QRK9 145 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 M0R233 179 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 HS3ST1O14792 307 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 SPRY3O43610 288 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 CTAG2O75638 210 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 RHBDL1O75783 438 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 CLDN1O95832 211 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 SFTPBP07988 381 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 CD55P08174 381 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 PGA5P0DJD9 388 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 MGMTP16455 207 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 BCL3P20749 454 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 SERPINA2P20848 420 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 CDK2P24941 298 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 APOBEC3AP31941 199 aaPredicted RBP5.61□□□□□ -1.51
USP48-208ENST00000479177 MNDAP41218 407 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 RPS27AP62979 156 aaKnown RBP5.61□□□□□ -1.51
USP48-208ENST00000479177 MZT1Q08AG7 82 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 ZNF846Q147U1 533 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 RSU1Q15404 277 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 ZNF79Q15937 498 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 MST1LQ2TV78 715 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 BAIAP2L2Q6UXY1 529 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 MKXQ8IYA7 352 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 FBXL14Q8N1E6 418 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 SCCPDHQ8NBX0 429 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 Q8NFD4 153 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 OR51F2Q8NH61 342 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 KCNG3Q8TAE7 436 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 ITLN1Q8WWA0 313 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 DIRAS2Q96HU8 199 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 OR2V2Q96R30 315 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 NRIP2Q9BQI9 281 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 TMEM59Q9BXS4 323 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 SRRQ9GZT4 340 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 LPAR5Q9H1C0 372 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 BANF2Q9H503 90 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 ELL3Q9HB65 397 aaPredicted RBP5.61□□□□□ -1.51
USP48-208ENST00000479177 DYNLRB1Q9NP97 96 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 NKIRAS2Q9NYR9 191 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 CISD1Q9NZ45 108 aaKnown RBP5.61□□□□□ -1.51
USP48-208ENST00000479177 MTCH1Q9NZJ7 389 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 RAB22AQ9UL26 194 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 ZDHHC8Q9ULC8 765 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 ING4Q9UNL4 249 aa5.61□□□□□ -1.51
USP48-208ENST00000479177 CREBBPQ92793 2442 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 DSCAMO60469 2012 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 CELSR2Q9HCU4 2923 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 A0A0A6YYH2 397 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 A0A0G2JMP0 313 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 A0A0X1KG70 313 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 FABP12A6NFH5 140 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 A6NJ64 397 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 A6NLC8 198 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 FOXI3A8MTJ6 420 aaPredicted RBP5.6□□□□□ -1.51
USP48-208ENST00000479177 C17orf100A8MU93 164 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 F8VVB4 439 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 F8VWA3 439 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 TRAPPC2LH3BP13 241 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 RAB27BO00194 218 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 NOS1APO75052 506 aaPredicted RBP5.6□□□□□ -1.51
USP48-208ENST00000479177 ZNF780AO75290 641 aaPredicted RBP5.6□□□□□ -1.51
USP48-208ENST00000479177 CRTAPO75718 401 aaPredicted RBP5.6□□□□□ -1.51
USP48-208ENST00000479177 SCGNO76038 276 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 CYB5AP00167 134 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 GRPP07492 148 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 DANCRP0C864 163 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 TNFSF4P23510 183 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 PTBP1P26599 531 aaKnown RBP eCLIP5.6□□□□□ -1.51
USP48-208ENST00000479177 CD40LGP29965 261 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 TALDO1P37837 337 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 NR4A2P43354 598 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 NPBWR2P48146 333 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 PTH2RP49190 550 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 SRP9P49458 86 aaKnown RBP5.6□□□□□ -1.51
USP48-208ENST00000479177 PPOXP50336 477 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 RBM11P57052 281 aaKnown RBP5.6□□□□□ -1.51
USP48-208ENST00000479177 TAS2R20P59543 309 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 FGF12P61328 243 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 ERVK11-1P61568 191 aa5.6□□□□□ -1.51
USP48-208ENST00000479177 SNRPD2P62316 118 aaKnown RBP5.6□□□□□ -1.51
USP48-208ENST00000479177 TNFAIP6P98066 277 aaPredicted RBP5.6□□□□□ -1.51
USP48-208ENST00000479177 ZNF45Q02386 682 aa5.6□□□□□ -1.51
Retrieved 100 of 20,778 RNA–protein pairs in 28.2 ms