RNA–Protein interactions for RNA: ENST00000479161.5

C9orf3-217, Transcript of chromosome 9 open reading frame 3, humanhuman

TSL 5

Gene C9orf3, Length 942 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
C9orf3-217ENST00000479161 PSMA1P25786 263 aaKnown RBP12.76□□□□□ -0.37
C9orf3-217ENST00000479161 BDKRB2P30411 391 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 NPBWR2P48146 333 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 MTNR1BP49286 362 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 POU3F4P49335 361 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 FGF12P61328 243 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 MLLT11Q13015 90 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-217ENST00000479161 DOC2BQ14184 412 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 TRAM1Q15629 374 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 ZNF418Q8TF45 676 aaPredicted RBP12.76□□□□□ -0.37
C9orf3-217ENST00000479161 PHYHIPQ92561 330 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 EMG1Q92979 244 aaKnown RBP12.76□□□□□ -0.37
C9orf3-217ENST00000479161 DERL3Q96Q80 235 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 OR5M11Q96RB7 305 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 JMJD8Q96S16 334 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 SUCNR1Q9BXA5 334 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 PRDM13Q9H4Q3 707 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 PCDHB16Q9NRJ7 776 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 TAS2R4Q9NYW5 299 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 IL36GQ9NZH8 169 aa12.76□□□□□ -0.37
C9orf3-217ENST00000479161 SPRY1O43609 319 aaPredicted RBP12.75□□□□□ -0.37
C9orf3-217ENST00000479161 SELLP14151 372 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 BCL3P20749 454 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 TGFBR2P37173 567 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 PTGFRP43088 359 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 MED22Q15528 200 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 NHLRC3Q5JS37 347 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 OR8H2Q8N162 312 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 ZFP41Q8N8Y5 198 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 CHST4Q8NCG5 386 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 TMEM185AQ8NFB2 350 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 OR52N4Q8NGI2 321 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 OR51A2Q8NGJ7 313 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 OR51T1Q8NGJ9 327 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 PPP1R35Q8TAP8 253 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 SGCDQ92629 289 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 TBX15Q96SF7 602 aa12.75□□□□□ -0.37
C9orf3-217ENST00000479161 RBFOX1Q9NWB1 397 aaKnown RBP12.75□□□□□ -0.37
C9orf3-217ENST00000479161 FBN1P35555 2871 aaKnown RBP12.74□□□□□ -0.37
C9orf3-217ENST00000479161 SH2D1BO14796 132 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 ZNF780AO75290 641 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-217ENST00000479161 HAND1O96004 215 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 RBP4P02753 201 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 SFTPBP07988 381 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 TMEM225BP0DP42 221 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 CD37P11049 281 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 CPEP16870 476 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 NDUFB7P17568 137 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 ERP29P30040 261 aaKnown RBP12.74□□□□□ -0.37
C9orf3-217ENST00000479161 ZNF93P35789 620 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-217ENST00000479161 HILS1P60008 231 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 COL10A1Q03692 680 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 MEF2CQ06413 473 aaPredicted RBP12.74□□□□□ -0.37
C9orf3-217ENST00000479161 GPR157Q5UAW9 335 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 LYPD6Q86Y78 171 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 NKAIN3Q8N8D7 197 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 OR13C5Q8NGS8 318 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 UFD1Q92890 307 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 SPACA5Q96QH8 159 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 OR14A2Q96R54 314 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 METTL8Q9H825 291 aaKnown RBP12.74□□□□□ -0.37
C9orf3-217ENST00000479161 OR14J1Q9UGF5 321 aa12.74□□□□□ -0.37
C9orf3-217ENST00000479161 GABRPO00591 440 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 PIN1P1O15428 100 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 ANGPTL7O43827 346 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 CSN2P05814 226 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 PRKACAP17612 351 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 PRTN3P24158 256 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 ARF6P62330 175 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 RPL31P62899 125 aaKnown RBP12.73□□□□□ -0.37
C9orf3-217ENST00000479161 PAX5Q02548 391 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 GUCA2AQ02747 115 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 BLMHQ13867 455 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 GPR176Q14439 515 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 IL13RA2Q14627 380 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 ACSM3Q53FZ2 586 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 DDI2Q5TDH0 399 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 C17orf107Q6ZR85 190 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 RNF144BQ7Z419 303 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 FGFRL1Q8N441 504 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 BPIFB2Q8N4F0 458 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 TMEM158Q8WZ71 300 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 H1FXQ92522 213 aaKnown RBP12.73□□□□□ -0.37
C9orf3-217ENST00000479161 RFT1Q96AA3 541 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 MRPS24Q96EL2 167 aaKnown RBP12.73□□□□□ -0.37
C9orf3-217ENST00000479161 GPER1Q99527 375 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 MGLLQ99685 303 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 UQCC2Q9BRT2 126 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 NCOR1P1Q9H4R4 102 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 IFT22Q9H7X7 185 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 LRRC42Q9Y546 428 aa12.73□□□□□ -0.37
C9orf3-217ENST00000479161 TRAV8-7A0A075B6U6 113 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 CENPVL3A0A0U1RRI6 287 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 hCG_1809904A0A1W2PP81 198 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 A0A1W2PPE2 198 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 A0A1W2PR64 198 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 A0A1W2PRV1 198 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 MGST3O14880 152 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 IGHV4-38-2P0DP08 117 aa12.72□□□□□ -0.37
C9orf3-217ENST00000479161 EEF1B2P24534 225 aaKnown RBP12.72□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 31.4 ms