RNA–Protein interactions for RNA: ENST00000478934.5

VPS52-217, Transcript of VPS52, GARP complex subunit, humanhuman

TSL 2

Gene VPS52, Length 2,602 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS52-217ENST00000478934 FAM71E2Q8N5Q1 922 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 FNDC9Q8TBE3 224 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 THOC3Q96J01 351 aaKnown RBP9.35□□□□□ -0.91
VPS52-217ENST00000478934 NRIP2Q9BQI9 281 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 CNTNAP3Q9BZ76 1288 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 IL36RNQ9UBH0 155 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 TMEM265A0A087WTH1 108 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 FAM166BA8MTA8 275 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 HSPB6O14558 160 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 NME2P1O60361 137 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 HLA-HP01893 362 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 CHATP28329 748 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 HOXA6P31267 233 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 FOXO1Q12778 655 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 Q6ZRG5 221 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 SGPP2Q8IWX5 399 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 CPT1CQ8TCG5 803 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 INTS12Q96CB8 462 aaKnown RBP9.35□□□□□ -0.91
VPS52-217ENST00000478934 AKR1E2Q96JD6 320 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 C20orf24Q9BUV8 137 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 SF3B5Q9BWJ5 86 aaKnown RBP9.35□□□□□ -0.91
VPS52-217ENST00000478934 C1orf123Q9NWV4 160 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 FOXJ2Q9P0K8 574 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 TIMM10BQ9Y5J6 103 aa9.35□□□□□ -0.91
VPS52-217ENST00000478934 BOD1L1Q8NFC6 3051 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 hCG_38984A0A1B0GV85 526 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 GJE1A6NN92 205 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 NXPH3O95157 252 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 CER1O95813 267 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 CYC1P08574 325 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 DUSP1P28562 367 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 KCNJ3P48549 501 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 CYB561P49447 251 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 DUSP3P51452 185 aaPredicted RBP9.34□□□□□ -0.91
VPS52-217ENST00000478934 NAAAQ02083 359 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 PDZK1IP1Q13113 114 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 TRA2AQ13595 282 aaKnown RBP eCLIP9.34□□□□□ -0.91
VPS52-217ENST00000478934 C1orf210Q8IVY1 113 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 LINC00518Q8N0U6 118 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 OR52M1Q8NGK5 317 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 RXFP4Q8TDU9 374 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 SECTM1Q8WVN6 248 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 SCGB3A2Q96PL1 93 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 PRRG4Q9BZD6 226 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 FGF23Q9GZV9 251 aaPredicted RBP9.34□□□□□ -0.91
VPS52-217ENST00000478934 SH3BGRL3Q9H299 93 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 SLC7A10Q9NS82 523 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 LRFN1Q9P244 771 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 MED13Q9UHV7 2174 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 RNASEK-C17orf49H0YIS7 233 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 SPP1P10451 314 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 LYL1P12980 280 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 PPT1P50897 306 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 GFRA1P56159 465 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 FAM189A2Q15884 450 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 IGSF11Q5DX21 431 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 ABLIM2Q6H8Q1 611 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 C6orf15Q6UXA7 325 aaPredicted RBP9.34□□□□□ -0.91
VPS52-217ENST00000478934 LINC00696Q6ZRV3 163 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 SLC25A26Q70HW3 274 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 VASH2Q86V25 355 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 IQCF2Q8IXL9 164 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 OSR2Q8N2R0 312 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 OR51B6Q9H340 312 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 CALHM2Q9HA72 323 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 RCC2Q9P258 522 aaKnown RBP9.34□□□□□ -0.91
VPS52-217ENST00000478934 PRELID3BQ9Y3B1 194 aa9.34□□□□□ -0.91
VPS52-217ENST00000478934 CRYM-AS1A6NIL9 109 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 APOC1P02654 83 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 MBPP02686 304 aaPredicted RBP9.33□□□□□ -0.92
VPS52-217ENST00000478934 CRYBA1P05813 215 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 MMP7P09237 267 aaPredicted RBP9.33□□□□□ -0.92
VPS52-217ENST00000478934 DAOP14920 347 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 ARF1P84077 181 aaKnown RBP9.33□□□□□ -0.92
VPS52-217ENST00000478934 ZNF616Q08AN1 781 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 NSUN5P2Q63ZY6 315 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 DHRS11Q6UWP2 260 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 MEX3BQ6ZN04 569 aaKnown RBP9.33□□□□□ -0.92
VPS52-217ENST00000478934 TUSC5Q8IXB3 177 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 SPAG16Q8N0X2 631 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 SUMF1Q8NBK3 374 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 OR5T2Q8NGG2 359 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 SPSB1Q96BD6 273 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 ESRP2Q9H6T0 727 aaKnown RBP9.33□□□□□ -0.92
VPS52-217ENST00000478934 RCL1Q9Y2P8 373 aaKnown RBP9.33□□□□□ -0.92
VPS52-217ENST00000478934 AMDHD2Q9Y303 409 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 ESPL1Q14674 2120 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 TERTO14746 1132 aaKnown RBP9.33□□□□□ -0.92
VPS52-217ENST00000478934 NDUFA2O43678 99 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 DEDDO75618 318 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 OR7C1O76099 320 aaPredicted RBP9.33□□□□□ -0.92
VPS52-217ENST00000478934 CTSDP07339 412 aaPredicted RBP9.33□□□□□ -0.92
VPS52-217ENST00000478934 ZNF728P0DKX0 622 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 CAV2P51636 162 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 NHLH2Q02577 135 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 TMEM42Q69YG0 159 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 RAB11FIP2Q7L804 512 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 OR10Z1Q8NGY1 313 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 KCNE4Q8WWG9 221 aa9.33□□□□□ -0.92
VPS52-217ENST00000478934 RTN4IP1Q8WWV3 396 aaPredicted RBP9.33□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 54.9 ms