RNA–Protein interactions for RNA: ENST00000477649.1

VMA21-203, Transcript of VMA21, vacuolar ATPase assembly factor, humanhuman

TSL 3

Gene VMA21, Length 485 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VMA21-203ENST00000477649 FOXF2Q12947 444 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 HLXQ14774 488 aaPredicted RBP6.8□□□□□ -1.32
VMA21-203ENST00000477649 KIR2DS1Q14954 304 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 NKAPLQ5M9Q1 402 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 SHEQ5VZ18 495 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 SIGIRRQ6IA17 410 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 OR52W1Q6IF63 320 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 DHRS11Q6UWP2 260 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 SEM1Q6ZVN7 128 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 LYG2Q86SG7 212 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 MRGPRGQ86SM5 289 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 PEG10Q86TG7 708 aaKnown RBP6.8□□□□□ -1.32
VMA21-203ENST00000477649 CXorf67Q86X51 503 aaPredicted RBP6.8□□□□□ -1.32
VMA21-203ENST00000477649 CALHM1Q8IU99 346 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 OR10AD1Q8NGE0 317 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 OR2T35Q8NGX2 323 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 MITD1Q8WV92 249 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 MARS2Q96GW9 593 aaKnown RBP6.8□□□□□ -1.32
VMA21-203ENST00000477649 KRTAP4-12Q9BQ66 201 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 SEC22CQ9BRL7 303 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 ST6GALNAC5Q9BVH7 336 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 BEX2Q9BXY8 128 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 CLEC4MQ9H2X3 399 aaPredicted RBP6.8□□□□□ -1.32
VMA21-203ENST00000477649 OR51I2Q9H344 312 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 TMEM100Q9NV29 134 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 TREM2Q9NZC2 230 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 EHFQ9NZC4 300 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 SLC23A1Q9UHI7 598 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 GLS2Q9UI32 602 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 POU2F3Q9UKI9 436 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 ELF5Q9UKW6 265 aaPredicted RBP6.8□□□□□ -1.32
VMA21-203ENST00000477649 GPR132Q9UNW8 380 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 TP53TG5Q9Y2B4 290 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 ZNF835Q9Y2P0 537 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 FAM215AQ9Y5M1 114 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 SLC25A15Q9Y619 301 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 ZNF407Q9C0G0 2248 aa6.8□□□□□ -1.32
VMA21-203ENST00000477649 TNRC6AQ8NDV7 1962 aaKnown RBP6.79□□□□□ -1.32
VMA21-203ENST00000477649 DNAJC13O75165 2243 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 HMSDA8MTL9 139 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 F5H5P2 479 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 GEMIN2O14893 280 aaKnown RBP6.79□□□□□ -1.32
VMA21-203ENST00000477649 OR7C1O76099 320 aaPredicted RBP6.79□□□□□ -1.32
VMA21-203ENST00000477649 TOXO94900 526 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 DIRAS3O95661 229 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 HLA-AP01891 365 aaKnown RBP6.79□□□□□ -1.32
VMA21-203ENST00000477649 CRYAAP02489 173 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 FCGR3AP08637 254 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 CECR9P0C854 216 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 SFTPCP11686 197 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 PPP3CBP16298 524 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 CXCL3P19876 107 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 ZBTB25P24278 435 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 CD34P28906 385 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 GLP1RP43220 463 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 TDGF1P3P51864 188 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 UCP3P55916 312 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 IL13RA1P78552 427 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 DHODHQ02127 395 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 DHRS2Q13268 280 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 OR8G1Q15617 311 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 NKPD1Q17RQ9 610 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 SPIN3Q5JUX0 258 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 OR2T2Q6IF00 324 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 ZNF767PQ75MW2 155 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 MOB1BQ7L9L4 216 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 C6orf201Q7Z4U5 140 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 TMED4Q7Z7H5 227 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 FAM58AQ8N1B3 248 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 MUC20Q8N307 709 aaPredicted RBP6.79□□□□□ -1.32
VMA21-203ENST00000477649 Q8N3U1 123 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 ASCC1Q8N9N2 400 aaKnown RBP6.79□□□□□ -1.32
VMA21-203ENST00000477649 OR8G5Q8NG78 346 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 OR13G1Q8NGZ3 307 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 COQ8AQ8NI60 647 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 SLC25A40Q8TBP6 338 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 KLF14Q8TD94 323 aaPredicted RBP6.79□□□□□ -1.32
VMA21-203ENST00000477649 CAPSLQ8WWF8 208 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 FAAP24Q9BTP7 215 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 ADAT1Q9BUB4 502 aaKnown RBP6.79□□□□□ -1.32
VMA21-203ENST00000477649 KRTAP9-9Q9BYP9 154 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 KRTAP9-4Q9BYQ2 154 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 OR2J1Q9GZK6 312 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 CXXC4Q9H2H0 198 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 ZNF442Q9H7R0 627 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 SEBOXQ9HB31 216 aaPredicted RBP6.79□□□□□ -1.32
VMA21-203ENST00000477649 BEX1Q9HBH7 125 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 ZNF701Q9NV72 531 aaPredicted RBP6.79□□□□□ -1.32
VMA21-203ENST00000477649 AK3Q9UIJ7 227 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 PURGQ9UJV8 347 aaKnown RBP6.79□□□□□ -1.32
VMA21-203ENST00000477649 C14orf166Q9Y224 244 aaKnown RBP6.79□□□□□ -1.32
VMA21-203ENST00000477649 OSGIN2Q9Y236 505 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 VSIG4Q9Y279 399 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 CNOT1A5YKK6 2376 aaKnown RBP6.79□□□□□ -1.32
VMA21-203ENST00000477649 CACNA1GO43497 2377 aa6.79□□□□□ -1.32
VMA21-203ENST00000477649 IGHV2OR16-5A0A0B4J2B6 119 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 C9orf170A2RU37 121 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 OR2AT4A6NND4 320 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 A8MXE2 369 aa6.78□□□□□ -1.32
VMA21-203ENST00000477649 SLC22A5O76082 557 aa6.78□□□□□ -1.32
Retrieved 100 of 20,778 RNA–protein pairs in 28.4 ms