RNA–Protein interactions for RNA: ENST00000477573.1

RTFDC1-207, Transcript of Protein RTF2 homolog, humanhuman

TSL 1 (best)

Gene RTFDC1, Length 2,193 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RTFDC1-207ENST00000477573 ARF3P61204 181 aaPredicted RBP11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 ADAM8P78325 824 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 SLC17A1Q14916 467 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 VAMP3Q15836 100 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 DEFB134Q4QY38 66 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 STAC2Q6ZMT1 411 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 NIT1Q86X76 327 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 APH1AQ96BI3 265 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 PELI1Q96FA3 418 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 CD180Q99467 661 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 CDX2Q99626 313 aaPredicted RBP11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 LYRM4Q9HD34 91 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 FBXL17Q9UF56 701 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 PAM16Q9Y3D7 125 aa11.13□□□□□ -0.63
RTFDC1-207ENST00000477573 NUP210LQ5VU65 1888 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 B4GALT2O60909 372 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 PRH1P02810 166 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 RPL12P30050 165 aaKnown RBP11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 S100A10P60903 97 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 ID2Q02363 134 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 PAX2Q02962 417 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 LASP1Q14847 261 aaKnown RBP11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 ARHGAP11BQ3KRB8 267 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 TDRG1Q3Y452 100 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 AMZ1Q400G9 498 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 YOD1Q5VVQ6 348 aaPredicted RBP11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 LRRC25Q8N386 305 aaPredicted RBP11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 ZNF519Q8TB69 540 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 RPS4Y2Q8TD47 263 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 LRFN3Q9BTN0 628 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 RSPO3Q9BXY4 272 aaPredicted RBP11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 CNIH4Q9P003 139 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 DAPP1Q9UN19 280 aa11.12□□□□□ -0.63
RTFDC1-207ENST00000477573 A0A087WV62 115 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 A0A1W2PR77 199 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 M0QYG6 137 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 SOX1O00570 391 aaPredicted RBP11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 TIAF1O95411 115 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 HMGN2P05204 90 aaKnown RBP11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 CTSBP07858 339 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 C8orf89P0DMQ9 161 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 PVRP15151 417 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 FASLGP48023 281 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 HNRNPA3P51991 378 aaKnown RBP11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 PAFAH1B2P68402 229 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 UNQ5815/PRO19632Q6UWF5 114 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 DEFB119Q8N690 84 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 CSNK1A1LQ8N752 337 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 APCDD1LQ8NCL9 501 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 OR52L2PQ8NGH6 319 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 LMX1AQ8TE12 382 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 C2orf50Q96LR7 162 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 ZNF681Q96N22 645 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 RARRES2Q99969 163 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 SCN3AQ9NY46 2000 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 IGHV1-69-2A0A0G2JMI3 117 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 A0A1W2PS29 197 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 CDC14CA4D256 554 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 KLF4O43474 513 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 KLK2P20151 261 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 PTNP21246 168 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 LSSP48449 732 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 IL15RAQ13261 267 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 ZNF506Q5JVG8 444 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 ACTL10Q5JWF8 245 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 CHCHD2P9Q5T1J5 151 aaPredicted RBP11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 OR4A47Q6IF82 309 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 MDGA2Q7Z553 956 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 NUP43Q8NFH3 380 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 OR2T27Q8NH04 317 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 TAAR6Q96RI8 345 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 BCL2L10Q9HD36 194 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 TUBG2Q9NRH3 451 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 WSB1Q9Y6I7 421 aa11.11□□□□□ -0.63
RTFDC1-207ENST00000477573 A0A1W2PRS3 328 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 MEIS3P1A6NDR6 274 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 G3V4G9 280 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 H0Y8G0 127 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 M0R3H8 397 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 OR7C2O60412 319 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 FCGR2CP31995 323 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 CNN1P51911 297 aaKnown RBP11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 RND3P61587 244 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 TMEM144Q7Z5S9 345 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 ZNF761Q86XN6 746 aaPredicted RBP11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 SFTPA2Q8IWL1 248 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 ZNF679Q8IYX0 411 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 OR13C9Q8NGT0 318 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 ZNF417Q8TAU3 575 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 OR2V2Q96R30 315 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 WFDC6Q9BQY6 131 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 PARP12Q9H0J9 701 aaKnown RBP11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 SLC35D1Q9NTN3 355 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 LILRA5A6NI73 299 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 FAM166BA8MTA8 275 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 CD1BP29016 333 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 P2RY1P47900 373 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 RAB38P57729 211 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 RAB32Q13637 225 aa11.1□□□□□ -0.63
RTFDC1-207ENST00000477573 SHBQ15464 509 aa11.1□□□□□ -0.63
Retrieved 100 of 20,778 RNA–protein pairs in 45.1 ms