RNA–Protein interactions for RNA: ENST00000477561.5

HDAC6-221, Transcript of histone deacetylase 6, humanhuman

TSL 5

Gene HDAC6, Length 764 nt, Biotype processed transcript, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC6-221ENST00000477561 OR13C3Q8NGS6 347 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 OR14K1Q8NGZ2 314 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 S100ZQ8WXG8 99 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 ACOT12Q8WYK0 555 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 RGP1Q92546 391 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-221ENST00000477561 TMEM106AQ96A25 262 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 ZNF488Q96MN9 340 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 DUX5Q96PT3 197 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 PCGF1Q9BSM1 259 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 MS4A7Q9GZW8 240 aaPredicted RBP6.86□□□□□ -1.31
HDAC6-221ENST00000477561 OR51I2Q9H344 312 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 ABCB9Q9NP78 766 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 NOX4Q9NPH5 578 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 ESM1Q9NQ30 184 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 DNAJB11Q9UBS4 358 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 PEX16Q9Y5Y5 336 aa6.86□□□□□ -1.31
HDAC6-221ENST00000477561 TRBV5-7A0A0A0MS05 114 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 A0A0A6YYJ9 748 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 MDFIC2A0A1B0GVS7 189 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 ANKRD61A6NGH8 418 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 NOTOA8MTQ0 251 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 ENSAO43768 121 aaKnown RBP6.85□□□□□ -1.31
HDAC6-221ENST00000477561 CLEC2LP0C7M8 214 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 MUC1P15941 1255 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-221ENST00000477561 SRMP19623 302 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 FSTP19883 344 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 CCL1P22362 96 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 GLRA1P23415 457 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 CFHR2P36980 270 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 RANBP1P43487 201 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 GABRA2P47869 451 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 ARF6P62330 175 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 GNG3P63215 75 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 DYNC1I2Q13409 638 aaKnown RBP6.85□□□□□ -1.31
HDAC6-221ENST00000477561 STUMQ69YW2 141 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 MZT2AQ6P582 158 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 HAGHLQ6PII5 290 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-221ENST00000477561 RBMS3Q6XE24 437 aaKnown RBP6.85□□□□□ -1.31
HDAC6-221ENST00000477561 BRD3OSQ6XYD6 125 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 SLC36A1Q7Z2H8 476 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 ZDHHC22Q8N966 263 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 OR5A2Q8NGI9 324 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 OR6Q1Q8NGQ2 317 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 OR10Z1Q8NGY1 313 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 TRMT10AQ8TBZ6 339 aaKnown RBP6.85□□□□□ -1.31
HDAC6-221ENST00000477561 TBC1D15Q8TC07 691 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 NPRL2Q8WTW4 380 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 ITFG2Q969R8 447 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 UPRTQ96BW1 309 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 CEP19Q96LK0 163 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 ZNF48Q96MX3 618 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-221ENST00000477561 C6orf62Q9GZU0 229 aaPredicted RBP6.85□□□□□ -1.31
HDAC6-221ENST00000477561 ADAM30Q9UKF2 790 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 FOXJ3Q9UPW0 622 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 V9GYS6 101 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 STAB1Q9NY15 2570 aa6.85□□□□□ -1.31
HDAC6-221ENST00000477561 FAM230AA0A1W2PPH8 454 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 A0A1W2PPK0 400 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 MEGF11A6BM72 1044 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 OR5B21A6NL26 309 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 OR2AT4A6NND4 320 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 TRIM77I1YAP6 450 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 PIN1P1O15428 100 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 NDUFB3O43676 98 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 SYNGR1O43759 233 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 TOX4O94842 621 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 ZNF20P17024 532 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 HAAOP46952 286 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 PPP3R1P63098 170 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 ACTG1P63261 375 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 PRB3Q04118 309 aaPredicted RBP6.84□□□□□ -1.31
HDAC6-221ENST00000477561 BAMBIQ13145 260 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 TUSC1Q2TAM9 212 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 CLVS2Q5SYC1 327 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 FAM27D1Q5T7N8 215 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 ZBTB37Q5TC79 503 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 RUSC1-AS1Q66K80 236 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 SFXN4Q6P4A7 337 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 KRT74Q7RTS7 529 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 ANGPTL5Q86XS5 388 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 SERPINA12Q8IW75 414 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 PDZD9Q8IXQ8 264 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 NKAIN3Q8N8D7 197 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 PNLDC1Q8NA58 520 aaKnown RBP6.84□□□□□ -1.31
HDAC6-221ENST00000477561 OR51A4Q8NGJ6 313 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 OR10AC1Q8NH08 325 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 ANGPTL6Q8NI99 470 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 ZNF671Q8TAW3 534 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 AQP3Q92482 292 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 H1FXQ92522 213 aaKnown RBP6.84□□□□□ -1.31
HDAC6-221ENST00000477561 C10orf35Q96D05 121 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 WDFY2Q96P53 400 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 GAFA1Q96PS6 74 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 JMJD8Q96S16 334 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 TBX15Q96SF7 602 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 WDR12Q9GZL7 423 aaKnown RBP6.84□□□□□ -1.31
HDAC6-221ENST00000477561 PPIL3Q9H2H8 161 aaKnown RBP6.84□□□□□ -1.31
HDAC6-221ENST00000477561 PLEKHA1Q9HB21 404 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 HMG20AQ9NP66 347 aa6.84□□□□□ -1.31
HDAC6-221ENST00000477561 ABRACLQ9P1F3 81 aa6.84□□□□□ -1.31
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms