RNA–Protein interactions for RNA: ENST00000477547.6

SEC13-215, Transcript of SEC13 homolog, nuclear pore and COPII coat complex component, humanhuman

TSL 2

Gene SEC13, Length 1,313 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SEC13-215ENST00000477547 REG4Q9BYZ8 158 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 CST11Q9H112 138 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 HMG20AQ9NP66 347 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 GHRLQ9UBU3 117 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 STEAP1Q9UHE8 339 aa12.8□□□□□ -0.36
SEC13-215ENST00000477547 PRPF8Q6P2Q9 2335 aaKnown RBP eCLIP12.8□□□□□ -0.361e-9■■□□□ 13.2
SEC13-215ENST00000477547 IGKV1D-17A0A075B6S4 117 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 H7C1Q1 480 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 ADAM20O43506 726 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 CRTAPO75718 401 aaPredicted RBP12.79□□□□□ -0.36
SEC13-215ENST00000477547 IGHV2-5P01817 119 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 SLC2A2P11168 524 aaPredicted RBP12.79□□□□□ -0.36
SEC13-215ENST00000477547 PSG2P11465 335 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 CFPP27918 469 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 GABRA2P47869 451 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 TMBIM6P55061 237 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 GPR176Q14439 515 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 PIGYQ3MUY2 71 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 ELP2Q6IA86 826 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 NLRC3Q7RTR2 1065 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 FAM216BQ8N7L0 139 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 SPATA3Q8NHX4 192 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 ANGPTL6Q8NI99 470 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 NDNFQ8TB73 568 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 FAM46BQ96A09 425 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 ISOC1Q96CN7 298 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 ZNF665Q9H7R5 613 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 DAPK2Q9UIK4 370 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 ZNF222Q9UK12 451 aa12.79□□□□□ -0.36
SEC13-215ENST00000477547 A0A1B0GW55 424 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 RFPL4AA6NLU0 287 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 RFPL4AL1F8VTS6 287 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 TMPRSS2O15393 492 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 HAND1O96004 215 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 HEXAP06865 529 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 DUX4L2P0CJ85 424 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 DUX4L3P0CJ86 424 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 DUX4L4P0CJ87 422 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 DUX4L5P0CJ88 424 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 DUX4L6P0CJ89 424 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 DUX4L7P0CJ90 424 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 GTF2F2P13984 249 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 ARSBP15848 533 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 MGMTP16455 207 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 DUSP1P28562 367 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 IL2RGP31785 369 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 RANBP1P43487 201 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 RBM11P57052 281 aaKnown RBP12.78□□□□□ -0.36
SEC13-215ENST00000477547 LOXL1Q08397 574 aaPredicted RBP12.78□□□□□ -0.36
SEC13-215ENST00000477547 DUX4L9Q6RFH8 374 aaPredicted RBP12.78□□□□□ -0.36
SEC13-215ENST00000477547 LYPD2Q6UXB3 125 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 USP43Q70EL4 1123 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 SLC36A1Q7Z2H8 476 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 OSR2Q8N2R0 312 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 MAPK1IP1LQ8NDC0 245 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 OR8B3Q8NGG8 313 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 SLC25A28Q96A46 364 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 NEIL1Q96FI4 390 aaPredicted RBP12.78□□□□□ -0.36
SEC13-215ENST00000477547 GAFA1Q96PS6 74 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 OR8B2Q96RD0 313 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 CCL13Q99616 98 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 RBM38Q9H0Z9 239 aaKnown RBP12.78□□□□□ -0.36
SEC13-215ENST00000477547 DNTTIP1Q9H147 329 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 DCSTAMPQ9H295 470 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 BANF2Q9H503 90 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 LIN7BQ9HAP6 207 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 PATZ1Q9HBE1 687 aaKnown RBP12.78□□□□□ -0.36
SEC13-215ENST00000477547 PCDHB16Q9NRJ7 776 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 CTSZQ9UBR2 303 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 DUX4Q9UBX2 424 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 MIOXQ9UGB7 285 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 CEPT1Q9Y6K0 416 aa12.78□□□□□ -0.36
SEC13-215ENST00000477547 A0A0B4J203 849 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 F5H0A9 414 aaPredicted RBP12.77□□□□□ -0.37
SEC13-215ENST00000477547 H3BMQ9 156 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 NDUFA2O43678 99 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 MPIG6BO95866 241 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 LY6G6DO95868 133 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 VSIG8P0DPA2 414 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 SELLP14151 372 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 RPS19P39019 145 aaKnown RBP12.77□□□□□ -0.37
SEC13-215ENST00000477547 PITPNBP48739 271 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 CAPZA1P52907 286 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 IL13RA1P78552 427 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 IKZF1Q13422 519 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 IL13RA2Q14627 380 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 ZNF146Q15072 292 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 OR10K2Q6IF99 312 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 ZNF788Q6ZQV5 615 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 OR2W3Q7Z3T1 314 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 TMEM104Q8NE00 496 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 Q8NFD4 153 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 OR51D1Q8NGF3 324 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 OR51T1Q8NGJ9 327 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 FAM3DQ96BQ1 224 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 TMEM59Q9BXS4 323 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 GLS2Q9UI32 602 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 ST3GAL6Q9Y274 331 aa12.77□□□□□ -0.37
SEC13-215ENST00000477547 COL6A5A8TX70 2615 aa12.76□□□□□ -0.37
SEC13-215ENST00000477547 ARHGAP32A7KAX9 2087 aa12.76□□□□□ -0.37
Retrieved 100 of 20,778 RNA–protein pairs in 29.2 ms