RNA–Protein interactions for RNA: ENST00000477520.1

PTCD3-212, Transcript of pentatricopeptide repeat domain 3, humanhuman

TSL 4

Gene PTCD3, Length 556 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTCD3-212ENST00000477520 LEFTY2O00292 366 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 GEMIN2O14893 280 aaKnown RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 CCL25O15444 150 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF264O43296 627 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 B3GALT2O43825 422 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 SOX15O60248 233 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 FCMRO60667 390 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 CTSVO60911 334 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF217O75362 1048 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 CA11O75493 328 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 NDUFB2O95178 105 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 VENTXO95231 258 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 IL33O95760 270 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 TBX18O95935 607 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 CSTAP01040 98 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 KLK1P06870 262 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 PFN1P07737 140 aaKnown RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 OR5G3P0C626 314 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF705DP0CH99 300 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF705BP0CI00 300 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 GIMD1P0DJR0 217 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ATP1B2P14415 290 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF43P17038 809 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 AKR1C4P17516 323 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 CEBPBP17676 345 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 TCN2P20062 427 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 CCNOP22674 350 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 TNFSF4P23510 183 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 RBMXP38159 391 aaKnown RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 CCR2P41597 374 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 TSFMP43897 325 aaKnown RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 GABRA2P47869 451 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 LSSP48449 732 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 RAB28P51157 221 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 EFNA3P52797 238 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 TAS2R46P59540 309 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 RND3P61587 244 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 LCN6P62502 163 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 MFGE8Q08431 387 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 PMPCAQ10713 525 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 SCGB2A2Q13296 93 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 EIF3IQ13347 325 aaKnown RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 RAB32Q13637 225 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ENDOGQ14249 297 aaKnown RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 FZD2Q14332 565 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 SMIM21Q3B7S5 101 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF260Q3ZCT1 412 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 TP53I3Q53FA7 332 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 PDZD11Q5EBL8 140 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ACTL10Q5JWF8 245 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 LCE1AQ5T7P2 110 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 SP5Q6BEB4 398 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 TMEM225Q6GV28 225 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 PRSS57Q6UWY2 283 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 FAM151BQ6UXP7 276 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF66Q6ZN08 573 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF836Q6ZNA1 936 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 NUP54Q7Z3B4 507 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 LHFPL4Q7Z7J7 247 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 YAF2Q8IY57 180 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 AMER3Q8N944 861 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 OR5D18Q8NGL1 313 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 OR4S2Q8NH73 311 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 OR5K2Q8NHB8 316 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF563Q8TA94 476 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 FNDC9Q8TBE3 224 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ADAMTS18Q8TE60 1221 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 SKA2Q8WVK7 121 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 C11orf40Q8WZ69 217 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 OR1E3Q8WZA6 343 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 RAB8BQ92930 207 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ELSPBP1Q96BH3 223 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 SLAMF6Q96DU3 332 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 OR10C1Q96KK4 312 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 MRGPRX1Q96LB2 322 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 JSRP1Q96MG2 331 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF48Q96MX3 618 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 AMDHD1Q96NU7 426 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 OR8B4Q96RC9 309 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 TBX15Q96SF7 602 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 GABRG3Q99928 467 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 PDCD1LG2Q9BQ51 273 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ABHD6Q9BV23 337 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 CST9LQ9H4G1 147 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 BANF2Q9H503 90 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 PELI2Q9HAT8 420 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 SDF2L1Q9HCN8 221 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 TMEM9BQ9NQ34 198 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 RXFP3Q9NSD7 469 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZCCHC3Q9NUD5 404 aaKnown RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 ZNF701Q9NV72 531 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 PLEK2Q9NYT0 353 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 IL36AQ9UHA7 158 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 NAT8Q9UHE5 227 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 PSG11Q9UQ72 335 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 FUT9Q9Y231 359 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 LAMTOR2Q9Y2Q5 125 aa4.11□□□□□ -1.75
PTCD3-212ENST00000477520 RBM7Q9Y580 266 aaKnown RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 NUP210Q8TEM1 1887 aaPredicted RBP4.11□□□□□ -1.75
PTCD3-212ENST00000477520 HELZP42694 1942 aaKnown RBP4.11□□□□□ -1.75
Retrieved 100 of 20,778 RNA–protein pairs in 33.2 ms