RNA–Protein interactions for RNA: ENST00000477421.2

COL27A1-204, Transcript of collagen type XXVII alpha 1 chain, humanhuman

TSL 2

Gene COL27A1, Length 3,991 nt, Biotype processed transcript, Subcellular localisation Cytoplasm, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL27A1-204ENST00000477421 ADAT1Q9BUB4 502 aaKnown RBP9.65□□□□□ -0.87
COL27A1-204ENST00000477421 CHST5Q9GZS9 411 aa9.65□□□□□ -0.87
COL27A1-204ENST00000477421 RHOFQ9HBH0 211 aa9.65□□□□□ -0.87
COL27A1-204ENST00000477421 TMEM38BQ9NVV0 291 aa9.65□□□□□ -0.87
COL27A1-204ENST00000477421 GPR137BO60478 399 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 F12P00748 615 aaPredicted RBP9.64□□□□□ -0.87
COL27A1-204ENST00000477421 FSTP19883 344 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 TSC22D1Q15714 1073 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 SLC25A47Q6Q0C1 308 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 LYZL2Q7Z4W2 148 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 POC1BQ8TC44 478 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 AKR1E2Q96JD6 320 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 WDR54Q9H977 334 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 FBXL17Q9UF56 701 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 E5RGE8 158 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 E9PQ18 207 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 ARR3P36575 388 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 ECI1P42126 302 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 TMEM33P57088 247 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 UBE2KP61086 200 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 FHL1Q13642 323 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 ZNF266Q14584 549 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 C1orf100Q5SVJ3 147 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 ATP1A1-AS1Q5TC04 95 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 SRXN1Q9BYN0 137 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 GPR35Q9HC97 309 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 RAB18Q9NP72 206 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 NSG2Q9Y328 171 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 PRRC2CQ9Y520 2896 aaKnown RBP9.64□□□□□ -0.87
COL27A1-204ENST00000477421 FAM24AA6NFZ4 105 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 EFNA2O43921 213 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 NPIPB7O75200 414 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 KRASP01116 189 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 OR2B8PP59922 312 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 POLR2GP62487 172 aaKnown RBP eCLIP9.64□□□□□ -0.87
COL27A1-204ENST00000477421 JMJD6Q6NYC1 403 aaPredicted RBP9.64□□□□□ -0.87
COL27A1-204ENST00000477421 SKA3Q8IX90 412 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 TCTEX1D2Q8WW35 142 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 RTL8AQ9BWD3 113 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 OR2H1Q9GZK4 316 aa9.64□□□□□ -0.87
COL27A1-204ENST00000477421 RCL1Q9Y2P8 373 aaKnown RBP9.64□□□□□ -0.87
COL27A1-204ENST00000477421 INTS1Q8N201 2190 aaKnown RBP9.63□□□□□ -0.87
COL27A1-204ENST00000477421 IFNA4P05014 189 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 ISG15P05161 165 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 COX6A1P12074 109 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 IRF2P14316 349 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 DCAF10Q5QP82 559 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 CDCP2Q5VXM1 449 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 ZNF660Q6AZW8 331 aaPredicted RBP9.63□□□□□ -0.87
COL27A1-204ENST00000477421 SLC30A7Q8NEW0 376 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 OR11L1Q8NGX0 322 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 ZNF319Q9P2F9 582 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 IL17BQ9UHF5 180 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 CHCHD2Q9Y6H1 151 aaPredicted RBP9.63□□□□□ -0.87
COL27A1-204ENST00000477421 CREBBPQ92793 2442 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 A0A0G2JMM0 328 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 A0A1W2PPB8 328 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 A0A1W2PRS3 328 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 ZNF724A8MTY0 619 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 KIR3DP1A8MWS1 328 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 H2AFB1P0C5Y9 115 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 CD37P11049 281 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 CALCRP30988 508 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 SRPXP78539 464 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 ZNF766Q5HY98 468 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 FAM209AQ5JX71 171 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 FAM27BQ5VT28 67 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 THNSL2Q86YJ6 484 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 PPP1R35Q8TAP8 253 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 FAM131CQ96AQ9 280 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 FBXO17Q96EF6 278 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 NPDC1Q9NQX5 325 aaPredicted RBP9.63□□□□□ -0.87
COL27A1-204ENST00000477421 CACNA1BQ00975 2339 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 LINC00862A6NCI5 91 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 FIGNL2A6NMB9 653 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 FGF5P12034 268 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 PMP22Q01453 160 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 C1orf122Q6ZSJ8 110 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 NFAM1Q8NET5 270 aaPredicted RBP9.63□□□□□ -0.87
COL27A1-204ENST00000477421 OR14K1Q8NGZ2 314 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 PLEKHF2Q9H8W4 249 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 GFOD1Q9NXC2 390 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 OR5AC2Q9NZP5 309 aa9.63□□□□□ -0.87
COL27A1-204ENST00000477421 PCNX2A6NKB5 2137 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 DEFB108AA8MXU0 73 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 IFNA10P01566 189 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 RCC1P18754 421 aaPredicted RBP9.62□□□□□ -0.87
COL27A1-204ENST00000477421 MECP2P51608 486 aaKnown RBP9.62□□□□□ -0.87
COL27A1-204ENST00000477421 ERVK-16P61578 105 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 PRSS54Q6PEW0 395 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 OR10AD1Q8NGE0 317 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 ANGPTL4Q9BY76 406 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 UNKLQ9H9P5 680 aaKnown RBP9.62□□□□□ -0.87
COL27A1-204ENST00000477421 SPAARA0A1B0GVQ0 90 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 HMGB3O15347 200 aaKnown RBP9.62□□□□□ -0.87
COL27A1-204ENST00000477421 ADAM20O43506 726 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 ZP3P21754 424 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 AADACP22760 399 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 RAB11AP62491 216 aa9.62□□□□□ -0.87
COL27A1-204ENST00000477421 GNG3P63215 75 aa9.62□□□□□ -0.87
Retrieved 100 of 20,778 RNA–protein pairs in 65.9 ms