RNA–Protein interactions for RNA: ENST00000476777.5

BRCA1-213, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 5

Gene BRCA1, Length 769 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-213ENST00000476777 IGHA1P01876 353 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 TTRP02766 147 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 FAM90A15PP0C7V4 464 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 FAM90A13PP0C7W8 464 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 FAM90A14PP0C7W9 464 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 FAM90A24PP0C7X0 464 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 FAM106CPP0CH98 169 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 HSD17B1P14061 328 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 GRK1Q15835 563 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 DEFB136Q30KP8 78 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 TPTE2P1Q5T6R2 138 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 OR52W1Q6IF63 320 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 HEPN1Q6WQI6 88 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 OR5M8Q8NGP6 311 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 CEP19Q96LK0 163 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 DCLRE1BQ9H816 532 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 SEBOXQ9HB31 216 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-213ENST00000476777 NUFIP1Q9UHK0 495 aaKnown RBP8.94□□□□□ -0.98
BRCA1-213ENST00000476777 LAMP5Q9UJQ1 280 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 ZNF256Q9Y2P7 627 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-213ENST00000476777 UBE2J1Q9Y385 318 aaPredicted RBP8.94□□□□□ -0.98
BRCA1-213ENST00000476777 SMAD5-AS1Q9Y6J3 95 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 TNCP24821 2201 aa8.94□□□□□ -0.98
BRCA1-213ENST00000476777 A6NIN4 97 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 SEC14L6B5MCN3 397 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 PRR23D1E9PI22 279 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-213ENST00000476777 PRODHO43272 600 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 CCDC22O60826 627 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 HAND1O96004 215 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 PRR23D2P0DMB1 279 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-213ENST00000476777 GABRR1P24046 479 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 CDK2P24941 298 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 PEX2P28328 305 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 CD34P28906 385 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 ERP29P30040 261 aaKnown RBP8.93□□□□□ -0.98
BRCA1-213ENST00000476777 GDNFP39905 211 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 P2RX3P56373 397 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 ESRRGP62508 458 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 SLC35B1P78383 322 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 CBX1P83916 185 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 MFGE8Q08431 387 aaPredicted RBP8.93□□□□□ -0.98
BRCA1-213ENST00000476777 MICAQ29983 383 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 HLA-DRB5Q30154 266 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 ZFAND6Q6FIF0 208 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 CCDC144NLQ6NUI1 221 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 CD300LDQ6UXZ3 194 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 TRAPPC6BQ86SZ2 158 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 THNSL2Q86YJ6 484 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 C5orf56Q8N8D9 126 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 OR8U1Q8NH10 309 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 TEX47Q8TBZ9 253 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 SLAMF9Q96A28 289 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 CREB3L1Q96BA8 519 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 CITED4Q96RK1 184 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 NIPSNAP1Q9BPW8 284 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 MROQ9BYG7 248 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 ZNF286AQ9HBT8 521 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 IL36RNQ9UBH0 155 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 AKAP8LQ9ULX6 646 aaKnown RBP eCLIP8.93□□□□□ -0.98
BRCA1-213ENST00000476777 V9GYS6 101 aa8.93□□□□□ -0.98
BRCA1-213ENST00000476777 IGKV1-27A0A075B6S5 117 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 OOSP1A8MZH6 123 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 MGST3O14880 152 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 INMTO95050 263 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 RPLP1P05386 114 aaKnown RBP8.92□□□□□ -0.98
BRCA1-213ENST00000476777 CEACAM3P40198 252 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 MNDAP41218 407 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 MAGEA2P43356 314 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 OR3A1P47881 315 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 ROM1Q03395 351 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 ZNF91Q05481 1191 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 KIR2DS1Q14954 304 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 ZNF829Q3KNS6 432 aaPredicted RBP8.92□□□□□ -0.98
BRCA1-213ENST00000476777 UTF1Q5T230 341 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 SLX4IPQ5VYV7 408 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 TEX38Q6PEX7 206 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 LCNL1Q6ZST4 164 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 MEPCEQ7L2J0 689 aaKnown RBP8.92□□□□□ -0.98
BRCA1-213ENST00000476777 CPOQ8IVL8 374 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 ZNF679Q8IYX0 411 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 STPG2Q8N412 459 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 BBS1Q8NFJ9 593 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 OR14K1Q8NGZ2 314 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 TRMT10AQ8TBZ6 339 aaKnown RBP8.92□□□□□ -0.98
BRCA1-213ENST00000476777 CMTM5Q96DZ9 223 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 CADM1Q9BY67 442 aaKnown RBP8.92□□□□□ -0.98
BRCA1-213ENST00000476777 YIPF3Q9GZM5 350 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 GAL3ST2Q9H3Q3 398 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 U3KQV3 271 aa8.92□□□□□ -0.98
BRCA1-213ENST00000476777 A0A087X0M5 115 aa8.91□□□□□ -0.98
BRCA1-213ENST00000476777 TRGV10A0A0A0MS01 117 aa8.91□□□□□ -0.98
BRCA1-213ENST00000476777 A0A1B0GTI1 187 aa8.91□□□□□ -0.98
BRCA1-213ENST00000476777 A0A1B0GX30 115 aa8.91□□□□□ -0.98
BRCA1-213ENST00000476777 FAM230AA0A1W2PPH8 454 aa8.91□□□□□ -0.98
BRCA1-213ENST00000476777 LINC01548A6NM66 108 aa8.91□□□□□ -0.98
BRCA1-213ENST00000476777 H3BN98 237 aa8.91□□□□□ -0.98
BRCA1-213ENST00000476777 TOR1AO14656 332 aa8.91□□□□□ -0.98
BRCA1-213ENST00000476777 FGF16O43320 207 aa8.91□□□□□ -0.98
BRCA1-213ENST00000476777 ZNF254O75437 659 aa8.91□□□□□ -0.98
BRCA1-213ENST00000476777 SRSF10O75494 262 aaKnown RBP8.91□□□□□ -0.98
Retrieved 100 of 20,778 RNA–protein pairs in 24.1 ms