RNA–Protein interactions for RNA: ENST00000476739.5

HDAC3-208, Transcript of histone deacetylase 3, humanhuman

TSL 3

Gene HDAC3, Length 422 nt, Biotype retained intron, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC3-208ENST00000476739 SPHARQ15513 63 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 MED22Q15528 200 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 KISS1Q15726 138 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 SMIM21Q3B7S5 101 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 Q499Y3 187 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 YIF1BQ5BJH7 314 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 BTNL3Q6UXE8 466 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 C1QL2Q7Z5L3 287 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 SDSLQ96GA7 329 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 CCDC90BQ9GZT6 254 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 DNTTIP1Q9H147 329 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 SLC25A10Q9UBX3 287 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-208ENST00000476739 PRELID1Q9Y255 219 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 SOX21Q9Y651 276 aaPredicted RBP8.01□□□□□ -1.13
HDAC3-208ENST00000476739 JMJD1CQ15652 2540 aa8.01□□□□□ -1.13
HDAC3-208ENST00000476739 TRBV5-7A0A0A0MS05 114 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 ZNF879B4DU55 563 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 GABRPO00591 440 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 ENSAO43768 121 aaKnown RBP8□□□□□ -1.13
HDAC3-208ENST00000476739 KDM4BO94953 1096 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 CD1AP06126 327 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 CD2P06729 351 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 IGHV4-38-2P0DP08 117 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 MMP9P14780 707 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 NDUFB7P17568 137 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 DUSP1P28562 367 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 GP2P55259 537 aaKnown RBP8□□□□□ -1.13
HDAC3-208ENST00000476739 DLX1P56177 255 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 BDH1Q02338 343 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 COL10A1Q03692 680 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 PRB3Q04118 309 aaPredicted RBP8□□□□□ -1.13
HDAC3-208ENST00000476739 LRRC10Q5BKY1 277 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 RBM48Q5RL73 367 aaKnown RBP8□□□□□ -1.13
HDAC3-208ENST00000476739 CD276Q5ZPR3 534 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 PRSS48Q7RTY5 328 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 MKXQ8IYA7 352 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 BCL6BQ8N143 479 aaPredicted RBP8□□□□□ -1.13
HDAC3-208ENST00000476739 FAM58AQ8N1B3 248 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 LY6G5BQ8NDX9 201 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 TMEM185AQ8NFB2 350 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 TSPAN14Q8NG11 270 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 NANPQ8TBE9 248 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 C22orf15Q8WYQ4 148 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 H1FXQ92522 213 aaKnown RBP8□□□□□ -1.13
HDAC3-208ENST00000476739 EMG1Q92979 244 aaKnown RBP8□□□□□ -1.13
HDAC3-208ENST00000476739 DERL3Q96Q80 235 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 TBX15Q96SF7 602 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 DCTN5Q9BTE1 182 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 MRI1Q9BV20 369 aa8□□□□□ -1.13
HDAC3-208ENST00000476739 RPUSD1Q9UJJ7 312 aaKnown RBP8□□□□□ -1.13
HDAC3-208ENST00000476739 A0A087WXM4 84 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 TMEM82A0PJX8 343 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 BOLA2-SMG1P6H3BVE0 249 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 RGS13O14921 159 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 ZNF737O75373 536 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 KNG1P01042 644 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 HSMCR30P0CW71 290 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 PPIAL4GP0DN37 164 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 PRKACAP17612 351 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 EPHA1P21709 976 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 EEF1B2P24534 225 aaKnown RBP7.99□□□□□ -1.13
HDAC3-208ENST00000476739 TGFBR2P37173 567 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 OR3A4PP47883 348 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 CAV3P56539 151 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 ARF6P62330 175 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 PDCD1Q15116 288 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 FAM27D1Q5T7N8 215 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 DDI2Q5TDH0 399 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 LIPKQ5VXJ0 399 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 GPR141Q7Z602 305 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 OR4M1Q8NGD0 313 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 TRIM63Q969Q1 353 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 UPRTQ96BW1 309 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 NEURL2Q9BR09 285 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 PCGF1Q9BSM1 259 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 TMED9Q9BVK6 235 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 YTHDF1Q9BYJ9 559 aaKnown RBP7.99□□□□□ -1.13
HDAC3-208ENST00000476739 SIRPDQ9H106 197 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 PPIL3Q9H2H8 161 aaKnown RBP7.99□□□□□ -1.13
HDAC3-208ENST00000476739 CNTD2Q9H8S5 307 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 NEK6Q9HC98 313 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 NOX4Q9NPH5 578 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 C19orf12Q9NSK7 152 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 ZNF69Q9UC07 566 aa7.99□□□□□ -1.13
HDAC3-208ENST00000476739 TRAV40A0A0B4J280 105 aa7.98□□□□□ -1.13
HDAC3-208ENST00000476739 MEX3AA1L020 520 aaKnown RBP7.98□□□□□ -1.13
HDAC3-208ENST00000476739 K7N7A8 449 aa7.98□□□□□ -1.13
HDAC3-208ENST00000476739 PSPNO60542 156 aa7.98□□□□□ -1.13
HDAC3-208ENST00000476739 GPX5O75715 221 aa7.98□□□□□ -1.13
HDAC3-208ENST00000476739 TOX4O94842 621 aa7.98□□□□□ -1.13
HDAC3-208ENST00000476739 CDRT1O95170 752 aa7.98□□□□□ -1.13
HDAC3-208ENST00000476739 ECDO95905 644 aaPredicted RBP7.98□□□□□ -1.13
HDAC3-208ENST00000476739 HAND1O96004 215 aa7.98□□□□□ -1.13
HDAC3-208ENST00000476739 TK1P04183 234 aa7.98□□□□□ -1.13
HDAC3-208ENST00000476739 MAS1P04201 325 aa7.98□□□□□ -1.13
HDAC3-208ENST00000476739 ALDOBP05062 364 aa7.98□□□□□ -1.13
HDAC3-208ENST00000476739 TMEM225BP0DP42 221 aa7.98□□□□□ -1.13
HDAC3-208ENST00000476739 FSTP19883 344 aa7.98□□□□□ -1.13
HDAC3-208ENST00000476739 BDKRB2P30411 391 aa7.98□□□□□ -1.13
HDAC3-208ENST00000476739 ZNF93P35789 620 aaPredicted RBP7.98□□□□□ -1.13
Retrieved 100 of 20,778 RNA–protein pairs in 61.3 ms