RNA–Protein interactions for RNA: ENST00000475952.1

NUDCD3-206, Transcript of NudC domain containing 3, humanhuman

TSL 2

Gene NUDCD3, Length 983 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NUDCD3-206ENST00000475952 DHDHQ9UQ10 334 aa9.31□□□□□ -0.92
NUDCD3-206ENST00000475952 GPR137BO60478 399 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 ZNF737O75373 536 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 NDUFA7O95182 113 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 HAND1O96004 215 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 MT-ND2P03891 347 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 CCL3L1P16619 93 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 PRKACAP17612 351 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 BCL3P20749 454 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 PEX2P28328 305 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 ZNF273Q14593 569 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 RCN1Q15293 331 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 LRRC36Q1X8D7 754 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 SPIN3Q5JUX0 258 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 ZNF691Q5VV52 312 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 TTC23Q5W5X9 447 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 TMEM200BQ69YZ2 307 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 C17orf107Q6ZR85 190 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 SERPINA12Q8IW75 414 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 FAM58AQ8N1B3 248 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 PNKDQ8N490 385 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 ZSCAN4Q8NAM6 433 aaPredicted RBP9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 BEND2Q8NDZ0 799 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 PPP1R35Q8TAP8 253 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 CYGBQ8WWM9 190 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 TAF15Q92804 592 aaKnown RBP eCLIP9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 CPNE2Q96FN4 548 aaPredicted RBP9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 SNX22Q96L94 193 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 JAM3Q9BX67 310 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 ZCCHC4Q9H5U6 513 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 HEXA-AS1Q9H8Q6 139 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 FGF20Q9NP95 211 aaPredicted RBP9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 RBFOX1Q9NWB1 397 aaKnown RBP9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 C1RLQ9NZP8 487 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 ZNF281Q9Y2X9 895 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 PCDHGB5Q9Y5G0 923 aa9.3□□□□□ -0.92
NUDCD3-206ENST00000475952 SULT1B1O43704 296 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 WBP4O75554 376 aaKnown RBP9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 ZFPL1O95159 310 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 RBP4P02753 201 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 HCKP08631 526 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 LIMS3P0CW19 117 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 LIMS4P0CW20 117 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 MYL12AP19105 171 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 GABRR1P24046 479 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 DCKP27707 260 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 NPBWR2P48146 333 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 SNU13P55769 128 aaKnown RBP9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 PDZK1IP1Q13113 114 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 MED21Q13503 144 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 EDDM3AQ14507 147 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 ZNF146Q15072 292 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 GRK1Q15835 563 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 TAF9Q16594 264 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 SMN1Q16637 294 aaKnown RBP9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 HIST2H2BDQ6DRA6 164 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 DHRS7BQ6IAN0 325 aaPredicted RBP9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 HCP5Q6MZN7 132 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 TMPRSS11AQ6ZMR5 421 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 OR5D18Q8NGL1 313 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 OR5D14Q8NGL3 314 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 CNIH3Q8TBE1 160 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 RFT1Q96AA3 541 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 PDCD1LG2Q9BQ51 273 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 ZNF649Q9BS31 505 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 SEBOXQ9HB31 216 aaPredicted RBP9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 RHOFQ9HBH0 211 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 EXOSC4Q9NPD3 245 aaKnown RBP9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 IL36RNQ9UBH0 155 aa9.29□□□□□ -0.92
NUDCD3-206ENST00000475952 hADV38S2A0JD32 116 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 CLPSL1A2RUU4 121 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 C17orf98A8MV24 154 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 E9PI62 339 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 MAGEB3O15480 346 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 ALX3O95076 343 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 CLIC3O95833 236 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 CD2P06729 351 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 ZNF728P0DKX0 622 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 COX7A1P24310 79 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 LGALS4P56470 323 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 RELBQ01201 579 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 MEF2CQ06413 473 aaPredicted RBP9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 IL18R1Q13478 541 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 LRRC75BQ2VPJ9 315 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 CCDC58Q4VC31 144 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 OLFML2AQ68BL7 652 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 RPL22L1Q6P5R6 122 aaKnown RBP9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 ZNF782Q6ZMW2 699 aaPredicted RBP9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 SAXO1Q8IYX7 474 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 DHRSXQ8N5I4 330 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 C11orf42Q8N5U0 333 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 PARP16Q8N5Y8 322 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 OR13D1Q8NGV5 346 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 WFDC12Q8WWY7 111 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 ZNF714Q96N38 554 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 SPACA5Q96QH8 159 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 GSTK1Q9Y2Q3 226 aa9.28□□□□□ -0.92
NUDCD3-206ENST00000475952 TMEM82A0PJX8 343 aa9.27□□□□□ -0.93
NUDCD3-206ENST00000475952 FUOMA2VDF0 154 aa9.27□□□□□ -0.93
NUDCD3-206ENST00000475952 H3BUX3 64 aa9.27□□□□□ -0.93
Retrieved 100 of 20,778 RNA–protein pairs in 29 ms