RNA–Protein interactions for RNA: ENST00000475772.5

CALD1-217, Transcript of caldesmon 1, humanhuman

TSL 2

Gene CALD1, Length 753 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CALD1-217ENST00000475772 ACTG2P63267 376 aa8.32□□□□□ -1.08
CALD1-217ENST00000475772 ACTC1P68032 377 aa8.32□□□□□ -1.08
CALD1-217ENST00000475772 ACTA1P68133 377 aa8.32□□□□□ -1.08
CALD1-217ENST00000475772 PLEKHG7Q6ZR37 379 aa8.32□□□□□ -1.08
CALD1-217ENST00000475772 BCDIN3DQ7Z5W3 292 aaKnown RBP8.32□□□□□ -1.08
CALD1-217ENST00000475772 ELMOD2Q8IZ81 293 aa8.32□□□□□ -1.08
CALD1-217ENST00000475772 FOXRED1Q96CU9 486 aaPredicted RBP8.32□□□□□ -1.08
CALD1-217ENST00000475772 SLC25A19Q9HC21 320 aa8.32□□□□□ -1.08
CALD1-217ENST00000475772 MED4Q9NPJ6 270 aa8.32□□□□□ -1.08
CALD1-217ENST00000475772 INPP5EQ9NRR6 644 aa8.32□□□□□ -1.08
CALD1-217ENST00000475772 DNAJB9Q9UBS3 223 aa8.32□□□□□ -1.08
CALD1-217ENST00000475772 HUWE1Q7Z6Z7 4374 aaKnown RBP8.31□□□□□ -1.08
CALD1-217ENST00000475772 IGHV2-26A0A0B4J1V2 119 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 DBX1A6NMT0 343 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 CHRM2P08172 466 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 T-ENOLP0DO92 83 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 RIDAP52758 137 aaKnown RBP8.31□□□□□ -1.08
CALD1-217ENST00000475772 EDDM3BP56851 147 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 OR12D2P58182 307 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 EFNB1P98172 346 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 SLC34A1Q06495 639 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 EGFEM1PQ0D2K5 195 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 IL24Q13007 206 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 DYNC1I2Q13409 638 aaKnown RBP8.31□□□□□ -1.08
CALD1-217ENST00000475772 GK3PQ14409 553 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 UBE2V2Q15819 145 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 HSP90B2PQ58FF3 399 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 DEFB121Q5J5C9 76 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 MINOS1Q5TGZ0 78 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 LCN1P1Q5VSP4 162 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 COMMD2Q86X83 199 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 ASCC1Q8N9N2 400 aaKnown RBP8.31□□□□□ -1.08
CALD1-217ENST00000475772 OR4P4Q8NGL7 312 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 CANT1Q8WVQ1 401 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 MYDGFQ969H8 173 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 SNX22Q96L94 193 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 PKIBQ9C010 78 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 NDE1Q9NXR1 346 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 TVP23BQ9NYZ1 205 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 IL36RNQ9UBH0 155 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 POLDIP2Q9Y2S7 368 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 MINOS1-NBL1R4GNA1 71 aa8.31□□□□□ -1.08
CALD1-217ENST00000475772 TCRBV4S1A1TA0A5B7 111 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 SH2D7A6NKC9 451 aaPredicted RBP8.3□□□□□ -1.08
CALD1-217ENST00000475772 PEX14O75381 377 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 INMTO95050 263 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 CCL1P22362 96 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 GYS2P54840 703 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 CXCR4P61073 352 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 MEF2CQ06413 473 aaPredicted RBP8.3□□□□□ -1.08
CALD1-217ENST00000475772 SNAPC1Q16533 368 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 ZNF829Q3KNS6 432 aaPredicted RBP8.3□□□□□ -1.08
CALD1-217ENST00000475772 CCDC121Q6ZUS5 278 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 SSX6Q7RTT6 188 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 CENPVQ7Z7K6 275 aaPredicted RBP8.3□□□□□ -1.08
CALD1-217ENST00000475772 OR8H2Q8N162 312 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 Q8N1Y9 231 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 ARHGAP24Q8N264 748 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 TRMT10AQ8TBZ6 339 aaKnown RBP8.3□□□□□ -1.08
CALD1-217ENST00000475772 ASB17Q8WXJ9 295 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 NSL1Q96IY1 281 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 ZNF714Q96N38 554 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 CADM1Q9BY67 442 aaKnown RBP8.3□□□□□ -1.08
CALD1-217ENST00000475772 SEBOXQ9HB31 216 aaPredicted RBP8.3□□□□□ -1.08
CALD1-217ENST00000475772 MRM2Q9UI43 246 aaKnown RBP8.3□□□□□ -1.08
CALD1-217ENST00000475772 OR52A1Q9UKL2 312 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 HHLA2Q9UM44 414 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 ARL2BPQ9Y2Y0 163 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 TSSC4Q9Y5U2 329 aaPredicted RBP8.3□□□□□ -1.08
CALD1-217ENST00000475772 SESN1Q9Y6P5 492 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 R4GMQ9 66 aa8.3□□□□□ -1.08
CALD1-217ENST00000475772 SACSQ9NZJ4 4579 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 FAM230AA0A1W2PPH8 454 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 LOC110117498-PIK3R3F6TDL0 507 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 H3BSH0 61 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 F2RL2O00254 374 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 PRKYO43930 277 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 E2F6O75461 281 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 LPLP06858 475 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 ANXA8P13928 327 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 AZGP1P25311 298 aaKnown RBP8.29□□□□□ -1.08
CALD1-217ENST00000475772 HOXD3P31249 432 aaPredicted RBP8.29□□□□□ -1.08
CALD1-217ENST00000475772 NPBWR2P48146 333 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 CRISP1P54107 249 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 ESRRGP62508 458 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 UTF1Q5T230 341 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 AADACL4Q5VUY2 407 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 ZNF322Q6U7Q0 402 aaPredicted RBP8.29□□□□□ -1.08
CALD1-217ENST00000475772 ETV3LQ6ZN32 361 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 GDPD3Q7L5L3 318 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 ZNF676Q8N7Q3 588 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 LINC00482Q8N8I6 264 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 SLAMF9Q96A28 289 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 ASB9Q96DX5 294 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 CHST6Q9GZX3 395 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 TMEM133Q9H2Q1 129 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 ADGRL4Q9HBW9 690 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 EXOSC5Q9NQT4 235 aaKnown RBP eCLIP8.29□□□□□ -1.08
CALD1-217ENST00000475772 IKZF2Q9UKS7 526 aa8.29□□□□□ -1.08
CALD1-217ENST00000475772 LINC00312Q9Y6C7 94 aa8.29□□□□□ -1.08
Retrieved 100 of 20,778 RNA–protein pairs in 758.2 ms