RNA–Protein interactions for RNA: ENST00000475657.1

FAM3A-218, Transcript of family with sequence similarity 3 member A, humanhuman

TSL 2

Gene FAM3A, Length 585 nt, Biotype retained intron, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
FAM3A-218ENST00000475657 NUFIP1Q9UHK0 495 aaKnown RBP11.3□□□□□ -0.6
FAM3A-218ENST00000475657 SF3B6Q9Y3B4 125 aaKnown RBP11.3□□□□□ -0.6
FAM3A-218ENST00000475657 TMEM269A0A1B0GVZ9 245 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 LOC110117498-PIK3R3F6TDL0 507 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 M0R1W7 72 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 CHST1O43916 411 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 RPP14O95059 124 aaKnown RBP11.29□□□□□ -0.6
FAM3A-218ENST00000475657 LALBAP00709 142 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 CCR9P51686 369 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 ZNF121P58317 390 aaPredicted RBP11.29□□□□□ -0.6
FAM3A-218ENST00000475657 GMFBP60983 142 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 CD83Q01151 205 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 MFGE8Q08431 387 aaPredicted RBP11.29□□□□□ -0.6
FAM3A-218ENST00000475657 CDK5R1Q15078 307 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 TIGD6Q17RP2 521 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 CASC10Q5T4H9 136 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 SYT6Q5T7P8 510 aaPredicted RBP11.29□□□□□ -0.6
FAM3A-218ENST00000475657 RPL22L1Q6P5R6 122 aaKnown RBP11.29□□□□□ -0.6
FAM3A-218ENST00000475657 SLC36A1Q7Z2H8 476 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 OR52H1Q8NGJ2 320 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 OR2G2Q8NGZ5 317 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 RPS4Y2Q8TD47 263 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 RNF166Q96A37 237 aaPredicted RBP11.29□□□□□ -0.6
FAM3A-218ENST00000475657 MGLLQ99685 303 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 BRD7Q9NPI1 651 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 DNAJB11Q9UBS4 358 aa11.29□□□□□ -0.6
FAM3A-218ENST00000475657 E9PI62 339 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 OGG1O15527 345 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 ZFPL1O95159 310 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 CD1AP06126 327 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 ANXA2P07355 339 aaKnown RBP11.28□□□□□ -0.6
FAM3A-218ENST00000475657 PF4V1P10720 104 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 PSMB9P28065 219 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 DLX1P56177 255 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 NANOS3P60323 173 aaKnown RBP11.28□□□□□ -0.6
FAM3A-218ENST00000475657 GPR50Q13585 617 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 ALKBH1Q13686 389 aaKnown RBP11.28□□□□□ -0.6
FAM3A-218ENST00000475657 HABP2Q14520 560 aaPredicted RBP11.28□□□□□ -0.6
FAM3A-218ENST00000475657 MICBQ29980 383 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 GFOD2Q3B7J2 385 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 WDR38Q5JTN6 314 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 BCL2L15Q5TBC7 163 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 PRSS45Q7RTY3 260 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 RNF144BQ7Z419 303 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 WDR86Q86TI4 376 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 CATSPERDQ86XM0 798 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 OR8S1Q8NH09 359 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 PIFOQ8TCI5 191 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 C17orf50Q8WW18 174 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 UFD1Q92890 307 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 SGK3Q96BR1 496 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 SMIM19Q96E16 107 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 OPALINQ96PE5 141 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 CCL13Q99616 98 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 MRPL15Q9P015 296 aaKnown RBP11.28□□□□□ -0.6
FAM3A-218ENST00000475657 OR52A1Q9UKL2 312 aa11.28□□□□□ -0.6
FAM3A-218ENST00000475657 TMEM212A6NML5 194 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 NDUFB3O43676 98 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 INMTO95050 263 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 TFF1P04155 84 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 TFAP2AP05549 437 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 UBCP0CG48 685 aaKnown RBP11.27□□□□□ -0.61
FAM3A-218ENST00000475657 HSMCR30P0CW71 290 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 GTF2A1P52655 376 aaPredicted RBP11.27□□□□□ -0.61
FAM3A-218ENST00000475657 GP2P55259 537 aaKnown RBP11.27□□□□□ -0.61
FAM3A-218ENST00000475657 MZT1Q08AG7 82 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 TPBGQ13641 420 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 DMKNQ6E0U4 476 aaPredicted RBP11.27□□□□□ -0.61
FAM3A-218ENST00000475657 FAM57BQ71RH2 274 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 C11orf53Q8IXP5 236 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 ELMOD2Q8IZ81 293 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 PRSS35Q8N3Z0 413 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 OR5T2Q8NGG2 359 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 LRRC29Q8WV35 223 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 DPF1Q92782 380 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 C12orf43Q96C57 262 aaKnown RBP11.27□□□□□ -0.61
FAM3A-218ENST00000475657 PGAM5Q96HS1 289 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 NKX3-1Q99801 234 aaPredicted RBP11.27□□□□□ -0.61
FAM3A-218ENST00000475657 PBOV1Q9GZY1 135 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 OR10A2Q9H208 303 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 FRRS1LQ9P0K9 344 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 ZNF319Q9P2F9 582 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 ZNF391Q9UJN7 358 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 GTF2A1LQ9UNN4 478 aa11.27□□□□□ -0.61
FAM3A-218ENST00000475657 KIR2DP1A0A0G2JNF4 349 aaPredicted RBP11.26□□□□□ -0.61
FAM3A-218ENST00000475657 TRBV2A0A0J9YWF9 115 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 A0A0U1RQV5 110 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 LCE6AA0A183 80 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 OR4C45A6NMZ5 311 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 ANKRD30BLA7E2S9 258 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 XRCC2O43543 280 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 PEX14O75381 377 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 TTRP02766 147 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 PF4P02776 101 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 CPEP16870 476 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 CELP19835 753 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 KIR3DL2P43630 455 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 RPL5P46777 297 aaKnown RBP11.26□□□□□ -0.61
FAM3A-218ENST00000475657 ALDH3B2P48448 385 aa11.26□□□□□ -0.61
FAM3A-218ENST00000475657 FAM3AP98173 230 aa11.26□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 77.3 ms