RNA–Protein interactions for RNA: ENST00000475243.5

VAPB-204, Transcript of VAMP associated protein B and C, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene VAPB, Length 7,936 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VAPB-204ENST00000475243 CXorf58Q96LI9 332 aa9.73□□□□□ -0.85
VAPB-204ENST00000475243 PDCD11Q14690 1871 aaKnown RBP9.72□□□□□ -0.85
VAPB-204ENST00000475243 HRKO00198 91 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 SNCGO76070 127 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 NTN1O95631 604 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 LINC00299Q6ZSB3 139 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 C17orf47Q8NEP4 570 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 OR5D13Q8NGL4 314 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 RASL12Q9NYN1 266 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 USF1P22415 310 aaPredicted RBP9.72□□□□□ -0.85
VAPB-204ENST00000475243 C1QL3Q5VWW1 255 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 NHLRC1Q6VVB1 395 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 ZNF66Q6ZN08 573 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 BHLHA15Q7RTS1 189 aaPredicted RBP9.72□□□□□ -0.85
VAPB-204ENST00000475243 CACFD1Q9UGQ2 172 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 ALPK2Q86TB3 2170 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 FGF2P09038 288 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 TNXAQ16473 311 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 ETV3LQ6ZN32 361 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 RGPD4Q7Z3J3 1758 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 FAM24AA6NFZ4 105 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 EPHA8P29322 1005 aaPredicted RBP9.72□□□□□ -0.85
VAPB-204ENST00000475243 GNG4P50150 75 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 WDR61Q9GZS3 305 aaKnown RBP9.72□□□□□ -0.85
VAPB-204ENST00000475243 WBP1LQ9NX94 342 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 M0R296 226 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 TOX3O15405 576 aaPredicted RBP9.72□□□□□ -0.85
VAPB-204ENST00000475243 PRR35P0CG20 571 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 RAB32Q13637 225 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 OR10AC1Q8NH08 325 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 ZNF275Q9NSD4 429 aaPredicted RBP9.72□□□□□ -0.85
VAPB-204ENST00000475243 SCN8AQ9UQD0 1980 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 MS4A18H0YCH9 400 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 K7ESF4 209 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 ZNF737O75373 536 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 MS4A18Q3C1V0 323 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 TUSC5Q8IXB3 177 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 C12orf57Q99622 126 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 PRRX2Q99811 253 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 CXXC4Q9H2H0 198 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 COA4Q9NYJ1 87 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 UFC1Q9Y3C8 167 aa9.72□□□□□ -0.85
VAPB-204ENST00000475243 KIAA1324LA8MWY0 1029 aaPredicted RBP9.71□□□□□ -0.85
VAPB-204ENST00000475243 NEURL1O76050 574 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 CHRNA7P36544 502 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 KCNJ3P48549 501 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 ALG14Q96F25 216 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 FKBP11Q9NYL4 201 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 NAT8BQ9UHF3 227 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 TMED3Q9Y3Q3 217 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 hADV38S2A0JD32 116 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 CAMPP49913 170 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 FOXO1Q12778 655 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 CDC20Q12834 499 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 MYPOPQ86VE0 399 aaPredicted RBP9.71□□□□□ -0.85
VAPB-204ENST00000475243 ZDHHC22Q8N966 263 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 ABHD3Q8WU67 409 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 CDX2Q99626 313 aaPredicted RBP9.71□□□□□ -0.85
VAPB-204ENST00000475243 YTHDF2Q9Y5A9 579 aaKnown RBP9.71□□□□□ -0.85
VAPB-204ENST00000475243 DYNLT3P51808 116 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 ZNF788Q6ZQV5 615 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 ZNF561Q8N587 486 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 DPF1Q92782 380 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 ZNF707Q96C28 371 aaPredicted RBP9.71□□□□□ -0.85
VAPB-204ENST00000475243 NOL4LQ96MY1 436 aaPredicted RBP9.71□□□□□ -0.85
VAPB-204ENST00000475243 GABRG3Q99928 467 aa9.71□□□□□ -0.85
VAPB-204ENST00000475243 SLIRPQ9GZT3 109 aaKnown RBP9.71□□□□□ -0.85
VAPB-204ENST00000475243 PGA3P0DJD8 388 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 SRD5A2P31213 254 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 SELENOPP49908 381 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 HIST1H3AP68431 136 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 ASB10Q8WXI3 467 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 IGHV3OR15-7A0A075B7D8 119 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 PATE3B3GLJ2 98 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 TNFSF14O43557 240 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 CD3EP07766 207 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 ANKRD34CP0C6C1 535 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 G6PCP35575 357 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 GZMKP49863 264 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 HLXQ14774 488 aaPredicted RBP9.71□□□□□ -0.86
VAPB-204ENST00000475243 ZNF596Q8TC21 504 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 VSTM2LQ96N03 204 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 RASL10BQ96S79 203 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 SIRT3Q9NTG7 399 aaPredicted RBP9.71□□□□□ -0.86
VAPB-204ENST00000475243 TCFL5Q9UL49 500 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 OR2M5A3KFT3 312 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 BCL3P20749 454 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 NHLH1Q02575 133 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 NHLH2Q02577 135 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 MSRB3Q8IXL7 192 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 PARD6AQ9NPB6 346 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 PCOLCE2Q9UKZ9 415 aa9.71□□□□□ -0.86
VAPB-204ENST00000475243 NDUFB6O95139 128 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 ACTL6AO96019 429 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 NXPH1P58417 271 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 TMEM211Q6ICI0 200 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 ETFRF1Q6IPR1 90 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 BHLHA9Q7RTU4 235 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 CCDC190Q86UF4 302 aa9.7□□□□□ -0.86
VAPB-204ENST00000475243 GATCO43716 136 aaKnown RBP9.7□□□□□ -0.86
Retrieved 100 of 20,778 RNA–protein pairs in 63.2 ms