RNA–Protein interactions for RNA: ENST00000474421.1

PDLIM4-206, Transcript of PDZ and LIM domain 4, humanhuman

TSL 3

Gene PDLIM4, Length 1,084 nt, Biotype retained intron.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PDLIM4-206ENST00000474421 PITPNC1Q9UKF7 332 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 LINC00312Q9Y6C7 94 aa16.49■□□□□ 0.23
PDLIM4-206ENST00000474421 TMEM82A0PJX8 343 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 J3QRE1 110 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 HTR1AP08908 422 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 GABRR1P24046 479 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 AZGP1P25311 298 aaKnown RBP16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 PAX6P26367 422 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 POU3F4P49335 361 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 ALDH3A2P51648 485 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 ACTA2P62736 377 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 ACTG2P63267 376 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 ZNF91Q05481 1191 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 ZNF146Q15072 292 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 GRK1Q15835 563 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 LHFPL4Q7Z7J7 247 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 C10orf67Q8IYJ2 551 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 ACBD7Q8N6N7 88 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 FAM110DQ8TAY7 271 aaPredicted RBP16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 RNF166Q96A37 237 aaPredicted RBP16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 FGGYQ96C11 551 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 MBOAT4Q96T53 435 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 NEK6Q9HC98 313 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 FRRS1LQ9P0K9 344 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 HHLA2Q9UM44 414 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 SIGLEC9Q9Y336 463 aa16.48■□□□□ 0.23
PDLIM4-206ENST00000474421 EI24O14681 340 aa16.47■□□□□ 0.23
PDLIM4-206ENST00000474421 RPSAP08865 295 aaKnown RBP16.47■□□□□ 0.23
PDLIM4-206ENST00000474421 OR12D2P58182 307 aa16.47■□□□□ 0.23
PDLIM4-206ENST00000474421 DYNC1I2Q13409 638 aaKnown RBP16.47■□□□□ 0.23
PDLIM4-206ENST00000474421 FAM189A2Q15884 450 aa16.47■□□□□ 0.23
PDLIM4-206ENST00000474421 ZBTB49Q6ZSB9 765 aa16.47■□□□□ 0.23
PDLIM4-206ENST00000474421 OPALINQ96PE5 141 aa16.47■□□□□ 0.23
PDLIM4-206ENST00000474421 RBFOX1Q9NWB1 397 aaKnown RBP16.47■□□□□ 0.23
PDLIM4-206ENST00000474421 TCF19Q9Y242 345 aa16.47■□□□□ 0.23
PDLIM4-206ENST00000474421 IGKV1-9A0A0C4DH69 117 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 MGST3O14880 152 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 CHST1O43916 411 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 BCL3P20749 454 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 ERP29P30040 261 aaKnown RBP16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 NPBWR2P48146 333 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 PDZK1IP1Q13113 114 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 SSX2Q16385 188 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 MINOS1Q5TGZ0 78 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 KLHDC1Q8N7A1 406 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 ZNF676Q8N7Q3 588 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 NKX3-1Q99801 234 aaPredicted RBP16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 CHST6Q9GZX3 395 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 RHOFQ9HBH0 211 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 EXOGQ9Y2C4 368 aaKnown RBP16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 PCDHGB5Q9Y5G0 923 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 SESN1Q9Y6P5 492 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 MINOS1-NBL1R4GNA1 71 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 TGP01266 2768 aa16.46■□□□□ 0.23
PDLIM4-206ENST00000474421 FUOMA2VDF0 154 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 H3BUI4 141 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 J3QLW9 94 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 SH2D1BO14796 132 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 IGHA1P01876 353 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 MT-ND2P03891 347 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 ZNF19P17023 458 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 PRKACAP17612 351 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 DYNLT3P51808 116 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 NANOS3P60323 173 aaKnown RBP16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 ZIK1Q3SY52 487 aaPredicted RBP16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 PLA1AQ53H76 456 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 TCF23Q7RTU1 214 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 DYNAPQ8N1N2 210 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 OR52N4Q8NGI2 321 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 OR13C3Q8NGS6 347 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 CFHR4Q92496 578 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 HMG20AQ9NP66 347 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 IL36RNQ9UBH0 155 aa16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 UBE2J1Q9Y385 318 aaPredicted RBP16.45■□□□□ 0.22
PDLIM4-206ENST00000474421 MEX3AA1L020 520 aaKnown RBP16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 E9PQ18 207 aa16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 MPZL2O60487 215 aa16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 PSPNO60542 156 aa16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 DUSP1P28562 367 aa16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 ALKBH1Q13686 389 aaKnown RBP16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 KPNB1Q14974 876 aaKnown RBP16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 PELI1Q96FA3 418 aa16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 C4orf36Q96KX1 117 aa16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 Q96MT0 163 aa16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 CLEC7AQ9BXN2 247 aa16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 TMEM133Q9H2Q1 129 aa16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 EXOSC4Q9NPD3 245 aaKnown RBP16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 FOXJ3Q9UPW0 622 aa16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 GMPPBQ9Y5P6 360 aa16.44■□□□□ 0.22
PDLIM4-206ENST00000474421 IGHV2-26A0A0B4J1V2 119 aa16.43■□□□□ 0.22
PDLIM4-206ENST00000474421 A6NDX4 124 aa16.43■□□□□ 0.22
PDLIM4-206ENST00000474421 OR4C45A6NMZ5 311 aa16.43■□□□□ 0.22
PDLIM4-206ENST00000474421 H3BNX3 289 aa16.43■□□□□ 0.22
PDLIM4-206ENST00000474421 F2RL2O00254 374 aa16.43■□□□□ 0.22
PDLIM4-206ENST00000474421 VSIG10L2P0DP72 767 aa16.43■□□□□ 0.22
PDLIM4-206ENST00000474421 RAB13P51153 203 aa16.43■□□□□ 0.22
PDLIM4-206ENST00000474421 P2RX3P56373 397 aa16.43■□□□□ 0.22
PDLIM4-206ENST00000474421 MRPL28Q13084 256 aaKnown RBP16.43■□□□□ 0.22
PDLIM4-206ENST00000474421 TRAPPC6BQ86SZ2 158 aa16.43■□□□□ 0.22
PDLIM4-206ENST00000474421 SAXO1Q8IYX7 474 aa16.43■□□□□ 0.22
Retrieved 100 of 20,778 RNA–protein pairs in 131.2 ms