RNA–Protein interactions for RNA: ENST00000474289.6

ECHDC1-214, Transcript of ethylmalonyl-CoA decarboxylase 1, humanhuman

APPRIS P3 TSL 5 BASIC

Gene ECHDC1, Length 2,443 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ECHDC1-214ENST00000474289 DDAH2O95865 285 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 NTSR1P30989 418 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 CDAP32320 146 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 H3F3AP84243 136 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 RTL6Q6ICC9 239 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 C9orf40Q8IXQ3 194 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 LGI3Q8N145 548 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 OR2AJ1Q8NGZ0 328 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 OR4X1Q8NH49 305 aa16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 RBMXL1Q96E39 390 aaKnown RBP16.23■□□□□ 0.19
ECHDC1-214ENST00000474289 C5orf63A6NC05 138 aa16.22■□□□□ 0.19
ECHDC1-214ENST00000474289 NPIPB13A6NJU9 1138 aa16.22■□□□□ 0.19
ECHDC1-214ENST00000474289 ZNF705GA8MUZ8 300 aaPredicted RBP16.22■□□□□ 0.19
ECHDC1-214ENST00000474289 NPIPB4C9JG80 1138 aa16.22■□□□□ 0.19
ECHDC1-214ENST00000474289 HOXB2P14652 356 aa16.22■□□□□ 0.19
ECHDC1-214ENST00000474289 OPRM1P35372 400 aa16.22■□□□□ 0.19
ECHDC1-214ENST00000474289 RUNX1Q01196 453 aa16.22■□□□□ 0.19
ECHDC1-214ENST00000474289 TAF9Q16594 264 aa16.22■□□□□ 0.19
ECHDC1-214ENST00000474289 FAM90A2PQ658T7 463 aa16.22■□□□□ 0.19
ECHDC1-214ENST00000474289 LANCL3Q6ZV70 420 aa16.22■□□□□ 0.19
ECHDC1-214ENST00000474289 CPEB2Q7Z5Q1 589 aaKnown RBP16.22■□□□□ 0.19
ECHDC1-214ENST00000474289 LANCL2Q9NS86 450 aa16.22■□□□□ 0.19
ECHDC1-214ENST00000474289 DKKL1Q9UK85 242 aa16.22■□□□□ 0.19
ECHDC1-214ENST00000474289 RER1O15258 196 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 HSPA12AO43301 675 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 ONECUT2O95948 504 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 CYB5R3P00387 301 aaPredicted RBP16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 FOLR1P15328 257 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 AKT2P31751 481 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 OR1D4P47884 311 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 NOVA1P51513 510 aaKnown RBP16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 ZNF880Q6PDB4 577 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 SLC16A14Q7RTX9 510 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 SLC35G3Q8N808 338 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 OR11L1Q8NGX0 322 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 FGF14Q92915 247 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 METTL9Q9H1A3 318 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 CALHM2Q9HA72 323 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 NECAP2Q9NVZ3 263 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 LRP4O75096 1905 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 SEMA4FO95754 770 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 EPHA1P21709 976 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 RAB11AP62491 216 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 FOXF1Q12946 379 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 MFAP5Q13361 173 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 ABLIM2Q6H8Q1 611 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 C17orf78Q8N4C9 275 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 SUMF1Q8NBK3 374 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 OR5C1Q8NGR4 320 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 CDCA3Q99618 268 aaPredicted RBP16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 CABLES2Q9BTV7 478 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 CHST11Q9NPF2 352 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 SPAG17Q6Q759 2223 aa16.21■□□□□ 0.19
ECHDC1-214ENST00000474289 FAM221AA4D161 298 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 ZNF732B4DXR9 585 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 PHF1O43189 567 aaPredicted RBP16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 HNRNPA2B1P22626 353 aaKnown RBP16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 GABREP78334 506 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 HHEXQ03014 270 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 PARM1Q6UWI2 310 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 Q6ZSR6 202 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 OR1P1Q8NH06 330 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 SNHG12Q9BXW3 62 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 GLRX2Q9NS18 164 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 KLHL13Q9P2N7 655 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 LOC102723971A0A1B0GUV8 181 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 FCGR2AP12318 317 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 ZFP36L1Q07352 338 aaKnown RBP16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 HLA-DQA1Q5Y7H0 255 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 MEX3BQ6ZN04 569 aaKnown RBP16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 TMEM123Q8N131 208 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 ZNF283Q8N7M2 679 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 OR5L2Q8NGL0 311 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 OR10G4Q8NGN3 311 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 FAAP24Q9BTP7 215 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 CERS4Q9HA82 394 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 PNRC2Q9NPJ4 139 aaKnown RBP16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 MTCH2Q9Y6C9 303 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 TDRD6O60522 2096 aaKnown RBP16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 DOCK8Q8NF50 2099 aa16.2■□□□□ 0.18
ECHDC1-214ENST00000474289 PROB1E7EW31 1015 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 KLF8O95600 359 aaPredicted RBP16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 PNRC1Q12796 327 aaPredicted RBP16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 CMTM1Q8IZ96 169 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 D2HGDHQ8N465 521 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 BADQ92934 168 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 GABRG3Q99928 467 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 MRPL13Q9BYD1 178 aaKnown RBP16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 KIR2DS5A0A0G2JLQ3 304 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 A0A0G2JNG1 304 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 NKX2-6A6NCS4 301 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 KIR2DS3K7RE56 304 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 ZNF133P52736 654 aaPredicted RBP16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 COL10A1Q03692 680 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 TLE4Q04727 773 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 KIR2DS5Q14953 304 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 COL13A1Q5TAT6 717 aaPredicted RBP16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 TMEM252Q8N6L7 170 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 OR10A7Q8NGE5 316 aa16.19■□□□□ 0.18
ECHDC1-214ENST00000474289 Q96M66 194 aa16.19■□□□□ 0.18
Retrieved 100 of 20,778 RNA–protein pairs in 45.2 ms