RNA–Protein interactions for RNA: ENST00000471694.1

CD47-204, Transcript of CD47 molecule, humanhuman

TSL 1 (best)

Gene CD47, Length 6,796 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CD47-204ENST00000471694 B9A039 149 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 FZD6O60353 706 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 ZNF137PP52743 207 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 FAM3AP98173 230 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 STXBP6Q8NFX7 210 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 LILRB4Q8NHJ6 448 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 SLC29A1Q99808 456 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 OR2H1Q9GZK4 316 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 ZNF354AO60765 605 aaPredicted RBP7.56□□□□□ -1.2
CD47-204ENST00000471694 PMS2P2O95744 297 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 RRASP10301 218 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 RPS4Y1P22090 263 aaKnown RBP7.56□□□□□ -1.2
CD47-204ENST00000471694 APOBEC3AP31941 199 aaPredicted RBP7.56□□□□□ -1.2
CD47-204ENST00000471694 HRH1P35367 487 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 C19orf54Q5BKX5 351 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 SLC22A18ASQ8N1D0 253 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 PARP12Q9H0J9 701 aaKnown RBP7.56□□□□□ -1.2
CD47-204ENST00000471694 DCAF16Q9NXF7 216 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 COL22A1Q8NFW1 1626 aaPredicted RBP7.56□□□□□ -1.2
CD47-204ENST00000471694 TXNDC12O95881 172 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 CD33P20138 364 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 GALR1P47211 349 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 SOWAHCQ53LP3 525 aaPredicted RBP7.56□□□□□ -1.2
CD47-204ENST00000471694 ITLN1Q8WWA0 313 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 ZNF501Q96CX3 271 aaPredicted RBP7.56□□□□□ -1.2
CD47-204ENST00000471694 TAF9BQ9HBM6 251 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 PIPOXQ9P0Z9 390 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 TRAPPC4Q9Y296 219 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 RCL1Q9Y2P8 373 aaKnown RBP7.56□□□□□ -1.2
CD47-204ENST00000471694 TTC3P53804 2025 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 IGHV3-72A0A0B4J1Y9 119 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 OR6C68A6NDL8 312 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 PI3P19957 117 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 PAX5Q02548 391 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 OR10J6PQ8NGY7 276 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 TMED6Q8WW62 240 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 DEDD2Q8WXF8 326 aa7.56□□□□□ -1.2
CD47-204ENST00000471694 A0A1W2PPE3 182 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 RFPL4AA6NLU0 287 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 RFPL4AL1F8VTS6 287 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 CT62P0C5K7 136 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 RPS10P46783 165 aaKnown RBP7.55□□□□□ -1.2
CD47-204ENST00000471694 UQCRFS1P47985 274 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 LSM11P83369 360 aaKnown RBP eCLIP7.55□□□□□ -1.2
CD47-204ENST00000471694 PRSS50Q9UI38 385 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 WIPI2Q9Y4P8 454 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 PROB1E7EW31 1015 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 S100A8P05109 93 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 CDKN1AP38936 164 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 HTR2BP41595 481 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 KISS1Q15726 138 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 TOMM34Q15785 309 aaPredicted RBP7.55□□□□□ -1.2
CD47-204ENST00000471694 SPRED3Q2MJR0 410 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 GTSCR1Q86UQ5 136 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 NECAP1Q8NC96 275 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 ZNF738Q8NE65 137 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 ATG2BQ96BY7 2078 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 TCRBV4S1A1TA0A5B7 111 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 GATCO43716 136 aaKnown RBP7.55□□□□□ -1.2
CD47-204ENST00000471694 CD40P25942 277 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 CYB5R2Q6BCY4 276 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 C16orf82Q7Z2V1 217 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 KCNRGQ8N5I3 272 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 ZNF519Q8TB69 540 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 GPA33Q99795 319 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 NIPSNAP3BQ9BS92 247 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 METTL1Q9UBP6 276 aaKnown RBP7.55□□□□□ -1.2
CD47-204ENST00000471694 SHROOM3Q8TF72 1996 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 LALBAP00709 142 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 TAGLN2P37802 199 aaKnown RBP7.55□□□□□ -1.2
CD47-204ENST00000471694 EMP1P54849 157 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 DNASE2BQ8WZ79 361 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 TMPRSS13Q9BYE2 586 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 CTDSP1Q9GZU7 261 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 GMPR2Q9P2T1 348 aaKnown RBP7.55□□□□□ -1.2
CD47-204ENST00000471694 ARL2-SNX15V9GYD0 113 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 H2AFB1P0C5Y9 115 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 OR13C7P0DN81 318 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 RAB9AP51151 201 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 UCP2P55851 309 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 ETFDHQ16134 617 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 TBR1Q16650 682 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 OR13C5Q8NGS8 318 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 BCL7BQ9BQE9 202 aa7.55□□□□□ -1.2
CD47-204ENST00000471694 MYH14Q7Z406 1995 aaKnown RBP7.55□□□□□ -1.2
CD47-204ENST00000471694 OR2T8A6NH00 312 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 TMEM200CA6NKL6 621 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 CHST1O43916 411 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 EMX1Q04741 257 aaPredicted RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 FA2HQ7L5A8 372 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 OTOSQ8NHW6 89 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 NEU4Q8WWR8 484 aaPredicted RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 TSPAN32Q96QS1 320 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 FAM103A1Q9BTL3 118 aaKnown RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 FAAP24Q9BTP7 215 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 CTNNBIP1Q9NSA3 81 aaPredicted RBP7.54□□□□□ -1.2
CD47-204ENST00000471694 C20orf141Q9NUB4 165 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 CHST2Q9Y4C5 530 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 ZNF883P0CG24 379 aa7.54□□□□□ -1.2
CD47-204ENST00000471694 GPX2P18283 190 aa7.54□□□□□ -1.2
Retrieved 100 of 20,778 RNA–protein pairs in 42.5 ms