RNA–Protein interactions for RNA: ENST00000471188.5

VPS50-210, Transcript of VPS50, EARP/GARPII complex subunit, humanhuman

TSL 1 (best)

Gene VPS50, Length 3,254 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VPS50-210ENST00000471188 EMDP50402 254 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 ARF3P61204 181 aaPredicted RBP3.71□□□□□ -1.82
VPS50-210ENST00000471188 CSNK1G2P78368 415 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 ARF1P84077 181 aaKnown RBP3.71□□□□□ -1.82
VPS50-210ENST00000471188 EWSR1Q01844 656 aaKnown RBP eCLIP3.71□□□□□ -1.82
VPS50-210ENST00000471188 IL15RAQ13261 267 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 UNC119Q13432 240 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 TESK1Q15569 626 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 NNATQ16517 81 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 PCK2Q16822 640 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 COA6Q5JTJ3 125 aaKnown RBP3.71□□□□□ -1.82
VPS50-210ENST00000471188 TSPO2Q5TGU0 170 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 AGBL4Q5VU57 503 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 KCTD18Q6PI47 426 aaPredicted RBP3.71□□□□□ -1.82
VPS50-210ENST00000471188 RSPO2Q6UXX9 243 aaPredicted RBP3.71□□□□□ -1.82
VPS50-210ENST00000471188 LYZL2Q7Z4W2 148 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 GATSQ8NAP1 163 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 OR2T10Q8NGZ9 312 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 CLDND2Q8NHS1 167 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 FAM3CQ92520 227 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 MOB3AQ96BX8 217 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 ZNF845Q96IR2 970 aaPredicted RBP3.71□□□□□ -1.82
VPS50-210ENST00000471188 CYYR1Q96J86 154 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 SLC22A12Q96S37 553 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 LMF2Q9BU23 707 aaKnown RBP3.71□□□□□ -1.82
VPS50-210ENST00000471188 KRTAP4-8Q9BYQ9 185 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 CTDSP1Q9GZU7 261 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 RBKSQ9H477 322 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 PELI2Q9HAT8 420 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 SDF2L1Q9HCN8 221 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 APOBEC3CQ9NRW3 190 aaKnown RBP eCLIP3.71□□□□□ -1.82
VPS50-210ENST00000471188 TMEM106BQ9NUM4 274 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 PLA2G3Q9NZ20 509 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 APOBEC3BQ9UH17 382 aaKnown RBP3.71□□□□□ -1.82
VPS50-210ENST00000471188 YIPF1Q9Y548 306 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 A0A1W2PP11 408 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 C4orf51C9J302 202 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 K7ESM1 405 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 NUPR1O60356 82 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 PPBPP02775 128 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 ZNF43P17038 809 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 CDKN1AP38936 164 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 CSNK1A1P48729 337 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 TPPP2P59282 170 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 MRPL49Q13405 166 aaKnown RBP3.71□□□□□ -1.82
VPS50-210ENST00000471188 FHL1Q13642 323 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 BSXQ3C1V8 233 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 SPATA45Q537H7 98 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 PHLDA2Q53GA4 152 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 OCIAD2Q56VL3 154 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 PRAMEF20Q5VT98 475 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 FAM90A2PQ658T7 463 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 SLC18B1Q6NT16 456 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 ABHD17CQ6PCB6 329 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 OGFOD3Q6PK18 319 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 MYPOPQ86VE0 399 aaPredicted RBP3.71□□□□□ -1.82
VPS50-210ENST00000471188 HIST2H2ABQ8IUE6 130 aaPredicted RBP3.71□□□□□ -1.82
VPS50-210ENST00000471188 RAB42Q8N4Z0 105 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 ST6GALNAC3Q8NDV1 305 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 OR52M1Q8NGK5 317 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 OR5C1Q8NGR4 320 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 ARHGAP5-AS1Q96IT6 56 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 LOXL4Q96JB6 756 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 ATP5SQ99766 215 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 MAGT1Q9H0U3 335 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 OR51I2Q9H344 312 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 Q9N2K0 584 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 TMEM242Q9NWH2 141 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 BET1LQ9NYM9 111 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 OR6C3Q9NZP0 311 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 ZNF319Q9P2F9 582 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 PRSS50Q9UI38 385 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 MRPS28Q9Y2Q9 187 aaKnown RBP3.71□□□□□ -1.82
VPS50-210ENST00000471188 RHBDD3Q9Y3P4 386 aa3.71□□□□□ -1.82
VPS50-210ENST00000471188 EML5Q05BV3 1969 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 SCO2A0A1W2PP80 73 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 K7ERU9 68 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 FGF17O60258 216 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 GHRHP01286 108 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 DBHP09172 617 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 CPMP14384 443 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 GCH1P30793 250 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 OR1D2P34982 312 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 BCL6P41182 706 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 PIGPP57054 158 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 TCEA2Q15560 299 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 ZNF74Q16587 644 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 TMEM241Q24JQ0 296 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 VAX1Q5SQQ9 334 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 SLC8B1Q6J4K2 584 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 GLIPR1L1Q6UWM5 242 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 BAGE3Q86Y29 109 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 BAGE2Q86Y30 109 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 WFDC8Q8IUA0 241 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 OR2C3Q8N628 320 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 OR52R1Q8NGF1 315 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 OTOSQ8NHW6 89 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 STARD4Q96DR4 205 aa3.7□□□□□ -1.82
VPS50-210ENST00000471188 ZNF764Q96H86 408 aaPredicted RBP3.7□□□□□ -1.82
VPS50-210ENST00000471188 TMEM59Q9BXS4 323 aa3.7□□□□□ -1.82
Retrieved 100 of 20,778 RNA–protein pairs in 25.2 ms