RNA–Protein interactions for RNA: ENST00000470076.1

COL7A1-208, Transcript of collagen type VII alpha 1 chain, humanhuman

TSL 2

Gene COL7A1, Length 651 nt, Biotype processed transcript, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
COL7A1-208ENST00000470076 AMIGO2Q86SJ2 522 aa14.09□□□□□ -0.15
COL7A1-208ENST00000470076 ZNF676Q8N7Q3 588 aa14.09□□□□□ -0.15
COL7A1-208ENST00000470076 OR4S1Q8NGB4 309 aa14.09□□□□□ -0.15
COL7A1-208ENST00000470076 GABARAPL3Q9BY60 117 aa14.09□□□□□ -0.15
COL7A1-208ENST00000470076 SESN1Q9Y6P5 492 aa14.09□□□□□ -0.15
COL7A1-208ENST00000470076 TRBV2A0A0J9YWF9 115 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 H3BUI4 141 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 F2RL2O00254 374 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 XPNPEP2O43895 674 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 PEX14O75381 377 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 IGHA1P01876 353 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 GABRR1P24046 479 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 ISL1P61371 349 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 NSUN5P1Q3KNT7 163 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 TMEM244Q5VVB8 128 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 ZBTB49Q6ZSB9 765 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 REC114Q7Z4M0 266 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 NDUFA11Q86Y39 141 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 FAM58AQ8N1B3 248 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 OR52N4Q8NGI2 321 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 WIPF2Q8TF74 440 aaPredicted RBP14.08□□□□□ -0.16
COL7A1-208ENST00000470076 EME1Q96AY2 570 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 GNG8Q9UK08 70 aa14.08□□□□□ -0.16
COL7A1-208ENST00000470076 IGHV2-26A0A0B4J1V2 119 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 MGST3O14880 152 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 ALDOBP05062 364 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 CD28P10747 220 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 PRKACBP22694 351 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 ERP29P30040 261 aaKnown RBP14.07□□□□□ -0.16
COL7A1-208ENST00000470076 KIR3DL2P43630 455 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 NPBWR2P48146 333 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 ZNF85Q03923 595 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 SLC34A1Q06495 639 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 ZNF146Q15072 292 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 TP53I3Q53FA7 332 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 FBLN7Q53RD9 439 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 ARSJQ5FYB0 599 aaPredicted RBP14.07□□□□□ -0.16
COL7A1-208ENST00000470076 SPIN3Q5JUX0 258 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 C1orf146Q5VVC0 180 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 UTS2BQ765I0 119 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 RDH10Q8IZV5 341 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 LYG1Q8N1E2 194 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 TPRX1Q8N7U7 411 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 OR4F17Q8NGA8 305 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 NDNFQ8TB73 568 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 OR4F4Q96R69 305 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 CLEC7AQ9BXN2 247 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 WNT10AQ9GZT5 417 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 CHST6Q9GZX3 395 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 TMEM133Q9H2Q1 129 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 RIBC2Q9H4K1 309 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 RBFOX1Q9NWB1 397 aaKnown RBP14.07□□□□□ -0.16
COL7A1-208ENST00000470076 IL36RNQ9UBH0 155 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 GLS2Q9UI32 602 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 HILPDAQ9Y5L2 63 aa14.07□□□□□ -0.16
COL7A1-208ENST00000470076 IGKV1-9A0A0C4DH69 117 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 DYNC1I1O14576 645 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 PSPNO60542 156 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 ENTPD6O75354 484 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 BCL3P20749 454 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 AZGP1P25311 298 aaKnown RBP14.06□□□□□ -0.16
COL7A1-208ENST00000470076 DUSP1P28562 367 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 POU3F4P49335 361 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 MTCP1P56278 107 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 CDC42P60953 191 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 IL18R1Q13478 541 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 LHFPL2Q6ZUX7 228 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 KCTD20Q7Z5Y7 419 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 OR2G2Q8NGZ5 317 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 TRUB1Q8WWH5 349 aaKnown RBP14.06□□□□□ -0.16
COL7A1-208ENST00000470076 RNF166Q96A37 237 aaPredicted RBP14.06□□□□□ -0.16
COL7A1-208ENST00000470076 SPSB1Q96BD6 273 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 ADAT3Q96EY9 351 aaPredicted RBP14.06□□□□□ -0.16
COL7A1-208ENST00000470076 CENPNQ96H22 339 aaPredicted RBP14.06□□□□□ -0.16
COL7A1-208ENST00000470076 OSBPL10Q9BXB5 764 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 OAZ3Q9UMX2 235 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 UBE2J1Q9Y385 318 aaPredicted RBP14.06□□□□□ -0.16
COL7A1-208ENST00000470076 KIAA2026Q5HYC2 2103 aa14.06□□□□□ -0.16
COL7A1-208ENST00000470076 FAM90A22PA8MWA6 464 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 ISG15P05161 165 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 ZNF20P17024 532 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 PRKACAP17612 351 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 ATF1P18846 271 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 HTR1DP28221 377 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 VDAC2P45880 294 aaPredicted RBP14.05□□□□□ -0.16
COL7A1-208ENST00000470076 OR3A1P47881 315 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 P2RX3P56373 397 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 BLCAPP62952 87 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 OR52W1Q6IF63 320 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 TRAPPC6BQ86SZ2 158 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 R3HDM4Q96D70 268 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 OR5M11Q96RB7 305 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 CITED2Q99967 270 aaPredicted RBP14.05□□□□□ -0.16
COL7A1-208ENST00000470076 MMP28Q9H239 520 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 HMG20AQ9NP66 347 aa14.05□□□□□ -0.16
COL7A1-208ENST00000470076 FUOMA2VDF0 154 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 SH2D1BO14796 132 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 ATP5HO75947 161 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 OCM2P0CE71 109 aa14.04□□□□□ -0.16
COL7A1-208ENST00000470076 OCMP0CE72 109 aaPredicted RBP14.04□□□□□ -0.16
Retrieved 100 of 20,778 RNA–protein pairs in 23.6 ms