RNA–Protein interactions for RNA: ENST00000470026.5

BRCA1-209, Transcript of BRCA1, DNA repair associated, humanhuman

TSL 1 (best)

Gene BRCA1, Length 2,108 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
BRCA1-209ENST00000470026 LGI3Q8N145 548 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 TOMM40LQ969M1 308 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 FOXB1Q99853 325 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 BIN3Q9NQY0 253 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 PLSCR2Q9NRY7 297 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 A0A0G2JMM0 328 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 A0A1W2PPB8 328 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 A0A1W2PRS3 328 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 KIR3DP1A8MWS1 328 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 B4GALT1P15291 398 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 DUSP1P28562 367 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 RBM11P57052 281 aaKnown RBP11.81□□□□□ -0.52
BRCA1-209ENST00000470026 FAM76BQ5HYJ3 339 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 SLC22A25Q6T423 547 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 AAED1Q7RTV5 226 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 FGFBP3Q8TAT2 258 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 DYRK2Q92630 601 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 SYT3Q9BQG1 590 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 SMIM3Q9BZL3 60 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 C11orf1Q9H5F2 150 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 ESRP2Q9H6T0 727 aaKnown RBP11.81□□□□□ -0.52
BRCA1-209ENST00000470026 MRPS18CQ9Y3D5 142 aaKnown RBP11.81□□□□□ -0.52
BRCA1-209ENST00000470026 SIT1Q9Y3P8 196 aa11.81□□□□□ -0.52
BRCA1-209ENST00000470026 NCKAP5O14513 1909 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 BORCS7-ASMTA0A0B4J1R7 106 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 LRRC3CA6NJW4 275 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 MMP7P09237 267 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-209ENST00000470026 TCN2P20062 427 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 PCBD1P61457 104 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 ZNF92Q03936 586 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 PEA15Q15121 130 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 SWI5Q1ZZU3 235 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 YRDCQ86U90 279 aaKnown RBP11.8□□□□□ -0.52
BRCA1-209ENST00000470026 OR4D5Q8NGN0 318 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 ALKBH3Q96Q83 286 aaPredicted RBP11.8□□□□□ -0.52
BRCA1-209ENST00000470026 IER2Q9BTL4 223 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 SMCO4Q9NRQ5 59 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 COA4Q9NYJ1 87 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 ST3GAL6Q9Y274 331 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 TMED3Q9Y3Q3 217 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 TMEM265A0A087WTH1 108 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 ZNF816-ZNF321PA0A0X1KG74 233 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 ZNF98A6NK75 572 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 XRCC2O43543 280 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 ZNF205O95201 554 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 SCGB1D2O95969 90 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 PATE4P0C8F1 98 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 EDN3P14138 238 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 RAB5CP51148 216 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 CLDN15P56746 228 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 SRSF7Q16629 238 aaKnown RBP eCLIP11.8□□□□□ -0.52
BRCA1-209ENST00000470026 NRN1LQ496H8 165 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 TSPO2Q5TGU0 170 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 COLCA1Q6ZS62 124 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 C15orf54Q8N8G6 183 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 OR52M1Q8NGK5 317 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 GPR35Q9HC97 309 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 ATPIF1Q9UII2 106 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 SLC7A11Q9UPY5 501 aa11.8□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A10PA6NDY2 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A18PA6NE21 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A16PA6NEW6 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A20PA6NIJ5 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A8PA6NJQ4 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A7PA6NKC0 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A22PA8MWA6 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A12PA8MX19 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A5PA8MXJ8 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A23PA8MXZ1 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 AGPAT2O15120 278 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 ST8SIA3O43173 380 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 CXCL13O43927 109 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 IGHEP01854 428 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A15PP0C7V4 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A13PP0C7W8 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A14PP0C7W9 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FAM90A24PP0C7X0 464 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FUT3P21217 361 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FOLR3P41439 243 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 RGS19P49795 217 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 PRSS12P56730 875 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 FXYD4P59646 89 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 MALLQ13021 153 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 CEACAM16Q2WEN9 425 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 PHLDA2Q53GA4 152 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 CCDC71LQ8N9Z2 235 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 OR2V1Q8NHB1 315 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 C1QTNF5Q9BXJ0 243 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 PRDM14Q9GZV8 571 aa11.79□□□□□ -0.52
BRCA1-209ENST00000470026 STRAPQ9Y3F4 350 aaKnown RBP11.79□□□□□ -0.52
BRCA1-209ENST00000470026 CYTIPO60759 359 aa11.78□□□□□ -0.52
BRCA1-209ENST00000470026 DIRAS3O95661 229 aa11.78□□□□□ -0.52
BRCA1-209ENST00000470026 P04436 131 aa11.78□□□□□ -0.52
BRCA1-209ENST00000470026 AADACP22760 399 aa11.78□□□□□ -0.52
BRCA1-209ENST00000470026 GLP1RP43220 463 aa11.78□□□□□ -0.52
BRCA1-209ENST00000470026 KCNJ3P48549 501 aa11.78□□□□□ -0.52
BRCA1-209ENST00000470026 MIDNQ504T8 468 aa11.78□□□□□ -0.52
BRCA1-209ENST00000470026 PEAR1Q5VY43 1037 aaPredicted RBP11.78□□□□□ -0.52
BRCA1-209ENST00000470026 BRICD5Q6PL45 260 aa11.78□□□□□ -0.52
BRCA1-209ENST00000470026 FAM185AQ8N0U4 392 aa11.78□□□□□ -0.52
Retrieved 100 of 20,778 RNA–protein pairs in 55.5 ms