RNA–Protein interactions for RNA: ENST00000470006.1

NCKIPSD-209, Transcript of NCK interacting protein with SH3 domain, humanhuman

TSL 2

Gene NCKIPSD, Length 814 nt, Biotype retained intron, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
NCKIPSD-209ENST00000470006 IL24Q13007 206 aa14.95□□□□□ -0.02
NCKIPSD-209ENST00000470006 ZNF260Q3ZCT1 412 aa14.95□□□□□ -0.02
NCKIPSD-209ENST00000470006 TPTE2P1Q5T6R2 138 aa14.95□□□□□ -0.02
NCKIPSD-209ENST00000470006 EGFL6Q8IUX8 553 aa14.95□□□□□ -0.02
NCKIPSD-209ENST00000470006 OR8U1Q8NH10 309 aa14.95□□□□□ -0.02
NCKIPSD-209ENST00000470006 SLAMF9Q96A28 289 aa14.95□□□□□ -0.02
NCKIPSD-209ENST00000470006 PKIBQ9C010 78 aa14.95□□□□□ -0.02
NCKIPSD-209ENST00000470006 GAL3ST2Q9H3Q3 398 aa14.95□□□□□ -0.02
NCKIPSD-209ENST00000470006 UBE2J1Q9Y385 318 aaPredicted RBP14.95□□□□□ -0.02
NCKIPSD-209ENST00000470006 HAND1O96004 215 aa14.94□□□□□ -0.02
NCKIPSD-209ENST00000470006 PRRX1P54821 245 aa14.94□□□□□ -0.02
NCKIPSD-209ENST00000470006 KPNB1Q14974 876 aaKnown RBP14.94□□□□□ -0.02
NCKIPSD-209ENST00000470006 ZNF829Q3KNS6 432 aaPredicted RBP14.94□□□□□ -0.02
NCKIPSD-209ENST00000470006 OVCH2Q7RTZ1 564 aa14.94□□□□□ -0.02
NCKIPSD-209ENST00000470006 SLC35E3Q7Z769 313 aa14.94□□□□□ -0.02
NCKIPSD-209ENST00000470006 FOXRED2Q8IWF2 684 aa14.94□□□□□ -0.02
NCKIPSD-209ENST00000470006 OR52N4Q8NGI2 321 aa14.94□□□□□ -0.02
NCKIPSD-209ENST00000470006 EMG1Q92979 244 aaKnown RBP14.94□□□□□ -0.02
NCKIPSD-209ENST00000470006 KRTAP17-1Q9BYP8 105 aa14.94□□□□□ -0.02
NCKIPSD-209ENST00000470006 DCLRE1BQ9H816 532 aa14.94□□□□□ -0.02
NCKIPSD-209ENST00000470006 SCOCQ9UIL1 159 aa14.94□□□□□ -0.02
NCKIPSD-209ENST00000470006 SLC7A11Q9UPY5 501 aa14.94□□□□□ -0.02
NCKIPSD-209ENST00000470006 SORL1Q92673 2214 aa14.93□□□□□ -0.02
NCKIPSD-209ENST00000470006 TRGV10A0A0A0MS01 117 aa14.93□□□□□ -0.02
NCKIPSD-209ENST00000470006 BUB1B-PAK6H3BSN5 160 aa14.93□□□□□ -0.02
NCKIPSD-209ENST00000470006 ALOX5APP20292 161 aa14.93□□□□□ -0.02
NCKIPSD-209ENST00000470006 HNF4GQ14541 408 aa14.93□□□□□ -0.02
NCKIPSD-209ENST00000470006 TEX38Q6PEX7 206 aa14.93□□□□□ -0.02
NCKIPSD-209ENST00000470006 ADAMTSL5Q6ZMM2 481 aa14.93□□□□□ -0.02
NCKIPSD-209ENST00000470006 CADM1Q9BY67 442 aaKnown RBP14.93□□□□□ -0.02
NCKIPSD-209ENST00000470006 TTTY10Q9BZA0 68 aa14.93□□□□□ -0.02
NCKIPSD-209ENST00000470006 ZNF286AQ9HBT8 521 aa14.93□□□□□ -0.02
NCKIPSD-209ENST00000470006 MTCH1Q9NZJ7 389 aa14.93□□□□□ -0.02
NCKIPSD-209ENST00000470006 IKZF2Q9UKS7 526 aa14.93□□□□□ -0.02
NCKIPSD-209ENST00000470006 U3KQV3 271 aa14.93□□□□□ -0.02
NCKIPSD-209ENST00000470006 MGST3O14880 152 aa14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 ARPC2O15144 300 aa14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 IGLV1-47P01700 117 aa14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 RPLP1P05386 114 aaKnown RBP14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 TMEM11P17152 192 aa14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 DUSP1P28562 367 aa14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 SNU13P55769 128 aaKnown RBP14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 HLA-DRB5Q30154 266 aa14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 TMEM42Q69YG0 159 aa14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 DEGS2Q6QHC5 323 aa14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 STPG2Q8N412 459 aa14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 RPEQ96AT9 228 aa14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 CMTM5Q96DZ9 223 aa14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 DGCR6LQ9BY27 220 aa14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 DNAJB9Q9UBS3 223 aa14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 NUFIP1Q9UHK0 495 aaKnown RBP14.92□□□□□ -0.02
NCKIPSD-209ENST00000470006 PSPNO60542 156 aa14.91□□□□□ -0.02
NCKIPSD-209ENST00000470006 IGLV3-1P01715 115 aa14.91□□□□□ -0.02
NCKIPSD-209ENST00000470006 RIDAP52758 137 aaKnown RBP14.91□□□□□ -0.02
NCKIPSD-209ENST00000470006 P2RX3P56373 397 aa14.91□□□□□ -0.02
NCKIPSD-209ENST00000470006 MFGE8Q08431 387 aaPredicted RBP14.91□□□□□ -0.02
NCKIPSD-209ENST00000470006 CXorf66Q5JRM2 361 aaPredicted RBP14.91□□□□□ -0.02
NCKIPSD-209ENST00000470006 HEPN1Q6WQI6 88 aa14.91□□□□□ -0.02
NCKIPSD-209ENST00000470006 CPOQ8IVL8 374 aa14.91□□□□□ -0.02
NCKIPSD-209ENST00000470006 ENTHD1Q8IYW4 607 aa14.91□□□□□ -0.02
NCKIPSD-209ENST00000470006 C5orf56Q8N8D9 126 aa14.91□□□□□ -0.02
NCKIPSD-209ENST00000470006 OR56B4Q8NH76 319 aa14.91□□□□□ -0.02
NCKIPSD-209ENST00000470006 TOMM40LQ969M1 308 aa14.91□□□□□ -0.02
NCKIPSD-209ENST00000470006 IL36RNQ9UBH0 155 aa14.91□□□□□ -0.02
NCKIPSD-209ENST00000470006 OOSP1A8MZH6 123 aa14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 LOC110117498-PIK3R3F6TDL0 507 aa14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 PRODHO43272 600 aa14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 TTRP02766 147 aa14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 MRPL3P09001 348 aaKnown RBP14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 KIR2DS1Q14954 304 aa14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 MICAQ29983 383 aa14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 BCL2L15Q5TBC7 163 aa14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 SLC25A26Q70HW3 274 aa14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 THNSL2Q86YJ6 484 aa14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 OR4D6Q8NGJ1 314 aa14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 HRASLS5Q96KN8 279 aa14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 CITED4Q96RK1 184 aa14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 SAMHD1Q9Y3Z3 626 aaKnown RBP14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 SIRT4Q9Y6E7 314 aaPredicted RBP14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 V9GYS6 101 aa14.9□□□□□ -0.02
NCKIPSD-209ENST00000470006 LY6LH3BQJ8 138 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 SIRPB1O00241 398 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 ZNF254O75437 659 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 CALCBP10092 127 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 HSD17B1P14061 328 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 NFYBP25208 207 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 GDNFP39905 211 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 PNLIPRP3Q17RR3 467 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 SLC35D3Q5M8T2 416 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 FAM27D1Q5T7N8 215 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 ZNF679Q8IYX0 411 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 DRAM1Q8N682 238 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 BBS1Q8NFJ9 593 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 NIPSNAP1Q9BPW8 284 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 YIPF3Q9GZM5 350 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 REEP1Q9H902 201 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 PLEKHA1Q9HB21 404 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 PCDHB16Q9NRJ7 776 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 ING3Q9NXR8 418 aa14.89□□□□□ -0.03
NCKIPSD-209ENST00000470006 CSMD3Q7Z407 3707 aa14.88□□□□□ -0.03
Retrieved 100 of 20,778 RNA–protein pairs in 45.7 ms