RNA–Protein interactions for RNA: ENST00000469358.5

VARS2-205, Transcript of valyl-tRNA synthetase 2, mitochondrial, humanhuman

TSL 5

Gene VARS2, Length 3,429 nt, Biotype retained intron, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VARS2-205ENST00000469358 ZNF343Q6P1L6 599 aa10.48□□□□□ -0.73
VARS2-205ENST00000469358 SLC23A3Q6PIS1 610 aa10.48□□□□□ -0.73
VARS2-205ENST00000469358 WDR74Q6RFH5 385 aaPredicted RBP10.48□□□□□ -0.73
VARS2-205ENST00000469358 MSI2Q96DH6 328 aaKnown RBP10.48□□□□□ -0.73
VARS2-205ENST00000469358 HS3ST6Q96QI5 342 aa10.48□□□□□ -0.73
VARS2-205ENST00000469358 EGLN1Q9GZT9 426 aa10.48□□□□□ -0.73
VARS2-205ENST00000469358 NECAP2Q9NVZ3 263 aa10.48□□□□□ -0.73
VARS2-205ENST00000469358 ST3GAL6Q9Y274 331 aa10.48□□□□□ -0.73
VARS2-205ENST00000469358 CLN5O75503 358 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 YIF1AO95070 293 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 MT-ND4LP03901 98 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 AGAP20933 346 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 CHATP28329 748 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 PLA2G5P39877 138 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 LSM6P62312 80 aaKnown RBP10.47□□□□□ -0.73
VARS2-205ENST00000469358 RUNX1Q01196 453 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 RAB30Q15771 203 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 HAGHQ16775 308 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 FAM209BQ5JX69 171 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 ACER2Q5QJU3 275 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 RABEPKQ7Z6M1 372 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 TMEM123Q8N131 208 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 MIOXQ9UGB7 285 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 RARRES3Q9UL19 164 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 HDGFL3Q9Y3E1 203 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 PI4KAP42356 2102 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 DOCK7Q96N67 2140 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 NSG1A0A0A6YYJ2 146 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 A0A0G2JMM0 328 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 A0A1W2PPB8 328 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 A0A1W2PRS3 328 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 KIR3DP1A8MWS1 328 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 YRDCQ86U90 279 aaKnown RBP10.47□□□□□ -0.73
VARS2-205ENST00000469358 MYPOPQ86VE0 399 aaPredicted RBP10.47□□□□□ -0.73
VARS2-205ENST00000469358 CALHM1Q8IU99 346 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 FADS6Q8N9I5 356 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 ZNF565Q8N9K5 539 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 KCNJ16Q9NPI9 418 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 LUZP4Q9P127 313 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 SEMA5BQ9P283 1151 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 ASPMQ8IZT6 3477 aa10.47□□□□□ -0.73
VARS2-205ENST00000469358 UBE2CO00762 179 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 ZIC3O60481 467 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 OR7C1O76099 320 aaPredicted RBP10.46□□□□□ -0.73
VARS2-205ENST00000469358 FOLR2P14207 255 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 CTSSP25774 331 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 P2RY1P47900 373 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 FAM189A2Q15884 450 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 CXorf66Q5JRM2 361 aaPredicted RBP10.46□□□□□ -0.73
VARS2-205ENST00000469358 C9orf135Q5VTT2 229 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 CDPF1Q6NVV7 123 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 LIAT1Q6ZQX7 453 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 ADPRHL1Q8NDY3 354 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 PIGCQ92535 297 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 NAT6Q93015 286 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 BORCS8Q96FH0 119 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 BCL2L14Q9BZR8 327 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 IGLV3-32A0A0A0MS00 114 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 IGHV5-10-1A0A0J9YXX1 117 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 ZNF587BE7ETH6 402 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 RRP8O43159 456 aaKnown RBP10.46□□□□□ -0.73
VARS2-205ENST00000469358 DKK1O94907 266 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 S100A9P06702 114 aaKnown RBP10.46□□□□□ -0.73
VARS2-205ENST00000469358 ZNF32P17041 273 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 DUSP1P28562 367 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 GLP1RP43220 463 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 P4HA3Q7Z4N8 544 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 TMEM171Q8WVE6 324 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 C18orf12Q96KH6 178 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 CCDC74BQ96LY2 380 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 ZNF442Q9H7R0 627 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 PLEKHA2Q9HB19 425 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 PARPBPQ9NWS1 579 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 IL36RNQ9UBH0 155 aa10.46□□□□□ -0.73
VARS2-205ENST00000469358 BORCS7-ASMTA0A0B4J1R7 106 aa10.46□□□□□ -0.74
VARS2-205ENST00000469358 IGSF23A1L1A6 192 aa10.46□□□□□ -0.74
VARS2-205ENST00000469358 GPR137BO60478 399 aa10.46□□□□□ -0.74
VARS2-205ENST00000469358 OTX1P32242 354 aaPredicted RBP10.46□□□□□ -0.74
VARS2-205ENST00000469358 AFF3P51826 1226 aaKnown RBP10.46□□□□□ -0.74
VARS2-205ENST00000469358 EWSR1Q01844 656 aaKnown RBP eCLIP10.46□□□□□ -0.74
VARS2-205ENST00000469358 ZNF92Q03936 586 aa10.46□□□□□ -0.74
VARS2-205ENST00000469358 SPIN3Q5JUX0 258 aa10.46□□□□□ -0.74
VARS2-205ENST00000469358 ZNF561Q8N587 486 aa10.46□□□□□ -0.74
VARS2-205ENST00000469358 EDARADDQ8WWZ3 215 aa10.46□□□□□ -0.74
VARS2-205ENST00000469358 TMEM54Q969K7 222 aa10.46□□□□□ -0.74
VARS2-205ENST00000469358 PROK2Q9HC23 129 aa10.46□□□□□ -0.74
VARS2-205ENST00000469358 FREM1Q5H8C1 2179 aa10.46□□□□□ -0.74
VARS2-205ENST00000469358 H0YL77 283 aa10.45□□□□□ -0.74
VARS2-205ENST00000469358 ST8SIA3O43173 380 aa10.45□□□□□ -0.74
VARS2-205ENST00000469358 SSSCA1O60232 199 aa10.45□□□□□ -0.74
VARS2-205ENST00000469358 CCL2P13500 99 aa10.45□□□□□ -0.74
VARS2-205ENST00000469358 EPHA1P21709 976 aa10.45□□□□□ -0.74
VARS2-205ENST00000469358 HTR5AP47898 357 aa10.45□□□□□ -0.74
VARS2-205ENST00000469358 RPS23P62266 143 aaKnown RBP10.45□□□□□ -0.74
VARS2-205ENST00000469358 IZUMO4Q1ZYL8 232 aa10.45□□□□□ -0.74
VARS2-205ENST00000469358 ZNF385CQ66K41 422 aaPredicted RBP10.45□□□□□ -0.74
VARS2-205ENST00000469358 MR1Q95460 341 aa10.45□□□□□ -0.74
VARS2-205ENST00000469358 SPTSSAQ969W0 71 aa10.45□□□□□ -0.74
VARS2-205ENST00000469358 GINS3Q9BRX5 216 aa10.45□□□□□ -0.74
VARS2-205ENST00000469358 ARV1Q9H2C2 271 aa10.45□□□□□ -0.74
Retrieved 100 of 20,778 RNA–protein pairs in 55.9 ms